Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU6-241P-201ENST00000391148 104 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 RNU6-177P-201ENST00000411257 104 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 RNU7-70P-201ENST00000516941 66 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.02□□□□□ -2.25
SIN3AQ96ST3 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 AP000753.3-201ENST00000604083 169 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 MIR6835-201ENST00000621552 64 ntBASIC1.02□□□□□ -2.25
SIN3AQ96ST3 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 SNORD37.2-201ENST00000391075 66 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 RPS3AP1-201ENST00000413190 320 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 MIR3668-201ENST00000582138 75 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 uc_338.6-201ENST00000613544 171 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 AC022709.1-201ENST00000615967 87 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 MIR6740-201ENST00000618268 113 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 MIR6841-201ENST00000637129 72 ntBASIC1.01□□□□□ -2.25
SIN3AQ96ST3 RNU4-11P-201ENST00000365287 132 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 SNORD116-18-201ENST00000383961 92 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.430-201ENST00000384081 110 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 snoU13.21-201ENST00000459368 105 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 AC004812.1-201ENST00000540773 146 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 MIR3144-201ENST00000579460 79 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.778-201ENST00000620203 90 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 AC021613.1-201ENST00000623880 111 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 MIR6866-201ENST00000638146 69 ntBASIC1□□□□□ -2.25
SIN3AQ96ST3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
SIN3AQ96ST3 RNU6-349P-201ENST00000362402 107 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.180-201ENST00000363867 113 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNU6-151P-201ENST00000364158 107 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNU4-16P-201ENST00000364737 141 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 SNORD114-24-201ENST00000365029 72 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNU6-449P-201ENST00000383914 107 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.398-201ENST00000383952 99 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 SNORD12C-201ENST00000386307 89 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNA5SP261-201ENST00000410536 106 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNU7-197P-201ENST00000458836 62 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNA5SP436-201ENST00000516020 115 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 AC112693.2-201ENST00000556538 232 ntBASIC0.99□□□□□ -2.25
SIN3AQ96ST3 RNY1P6-201ENST00000384193 109 ntBASIC0.98□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.98□□□□□ -2.25
SIN3AQ96ST3 MIR508-201ENST00000384857 115 ntBASIC0.98□□□□□ -2.25
SIN3AQ96ST3 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
SIN3AQ96ST3 RNU7-62P-201ENST00000458856 62 ntBASIC0.98□□□□□ -2.25
SIN3AQ96ST3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.98□□□□□ -2.25
SIN3AQ96ST3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.98□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.8-201ENST00000362353 102 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 RNU6-508P-201ENST00000363231 103 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.97□□□□□ -2.25
SIN3AQ96ST3 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 MTND5P41-201ENST00000517498 206 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 MIR3152-201ENST00000579801 74 ntBASIC0.97□□□□□ -2.25
SIN3AQ96ST3 RNU6-369P-201ENST00000362515 102 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 SNORA22.1-201ENST00000362701 134 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 MIR588-201ENST00000384900 83 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 MIR563-201ENST00000385080 79 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 RNU6-994P-201ENST00000410507 111 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 FABP5P4-201ENST00000437203 171 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.651-201ENST00000459380 103 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 AC021753.1-201ENST00000635724 168 ntBASIC0.96□□□□□ -2.26
SIN3AQ96ST3 SNORA20-201ENST00000384662 132 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 SNORD83.1-201ENST00000411362 77 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
SIN3AQ96ST3 AC010332.2-201ENST00000613083 1904 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 RNA5SP499-201ENST00000363982 119 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.464-201ENST00000384282 110 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 MIR1827-201ENST00000408549 66 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 MIR548I1-201ENST00000408810 149 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 RNA5SP144-201ENST00000410846 116 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
SIN3AQ96ST3 RNU6-1212P-201ENST00000517023 104 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.94□□□□□ -2.26
SIN3AQ96ST3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SIN3AQ96ST3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.94□□□□□ -2.26
SIN3AQ96ST3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6-309P-201ENST00000364573 106 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6-934P-201ENST00000365154 107 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6-460P-201ENST00000391158 108 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 AC015818.7-201ENST00000428754 109 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 MTATP6P21-201ENST00000440681 189 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 AC087499.7-201ENST00000441958 109 ntBASIC0.93□□□□□ -2.26
SIN3AQ96ST3 AC011603.4-201ENST00000611325 277 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms