Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC099513.1-201ENST00000490423 301 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 AC096720.1-201ENST00000604441 183 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 AC091304.10-201ENST00000641554 121 ntBASIC2.41□□□□□ -2.02
SYNGAP1Q96PV0 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 MRPL35P3-201ENST00000421557 364 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 IGLL4P-201ENST00000614590 133 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 MIR6841-201ENST00000637129 72 ntBASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SYNGAP1Q96PV0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 MIR424-201ENST00000362227 98 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.17-201ENST00000362433 111 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-592P-201ENST00000411333 103 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 RNU2-13P-201ENST00000515909 113 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 AL078603.1-201ENST00000603824 313 ntBASIC2.39□□□□□ -2.03
SYNGAP1Q96PV0 AL442644.1-201ENST00000454390 3105 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 RNY1P1-201ENST00000364372 112 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-60P-201ENST00000364792 103 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 SNORA24-201ENST00000384096 131 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-342P-201ENST00000384521 104 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 AL353813.1-201ENST00000440700 253 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 MIR1270-201ENST00000459320 83 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 snoU13.16-201ENST00000459350 104 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 MIR6734-201ENST00000621166 68 ntBASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.38□□□□□ -2.03
SYNGAP1Q96PV0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-1201P-201ENST00000384227 107 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 MIR520C-201ENST00000385005 87 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 SNORA31.17-201ENST00000516953 127 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 SNORA74.3-201ENST00000517108 154 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 AP003327.1-201ENST00000529684 127 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 MIR4452-201ENST00000583004 71 ntBASIC2.37□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.430-201ENST00000384081 110 ntBASIC2.36□□□□□ -2.03
SYNGAP1Q96PV0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
SYNGAP1Q96PV0 BX248123.2-201ENST00000606318 124 ntBASIC2.36□□□□□ -2.03
SYNGAP1Q96PV0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.95-201ENST00000363079 95 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 RNA5SP37-201ENST00000365420 130 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 MIR583-201ENST00000384846 75 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.593-201ENST00000410292 98 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 CYP3A52P-201ENST00000563326 91 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 MIR4777-201ENST00000583710 86 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 PVT1_3.1-201ENST00000620853 95 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 AC008133.2-201ENST00000624540 351 ntBASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SYNGAP1Q96PV0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 RNA5SP100-201ENST00000410903 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 RNA5SP59-201ENST00000410922 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 RNU7-2P-201ENST00000516096 62 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 Y_RNA.705-201ENST00000516862 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 MIR4529-201ENST00000578110 78 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 MIR4764-201ENST00000580680 88 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 MIR376B-201ENST00000614515 100 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.34□□□□□ -2.04
SYNGAP1Q96PV0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 RNU6-392P-201ENST00000364926 101 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 SNORD115-35-201ENST00000365122 82 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 RNA5SP450-201ENST00000411206 102 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 RPS29P28-201ENST00000446439 141 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 AC109327.2-201ENST00000448339 378 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 RNU7-43P-201ENST00000516554 64 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
SYNGAP1Q96PV0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 RNA5SP259-201ENST00000365541 109 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 RNU6-203P-201ENST00000384038 104 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 RNA5SP182-201ENST00000516064 82 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 RNU6-917P-201ENST00000516294 104 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 MIR8055-201ENST00000610739 97 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 AC022709.1-201ENST00000615967 87 ntBASIC2.32□□□□□ -2.04
SYNGAP1Q96PV0 AC105081.1-201ENST00000617727 106 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms