Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 7SK.13-201ENST00000622040 250 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 U2.22-201ENST00000636441 106 ntBASIC0.84□□□□□ -2.27
ZIM3Q96PE6 Y_RNA.470-201ENST00000384307 117 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 AC096949.1-201ENST00000412047 152 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU7-80P-201ENST00000459562 61 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RN7SKP19-201ENST00000516016 252 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU6-772P-201ENST00000516042 105 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU6-947P-201ENST00000516264 106 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.692-201ENST00000516627 105 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU7-53P-201ENST00000516705 60 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.83□□□□□ -2.28
ZIM3Q96PE6 AL365222.1-201ENST00000614661 98 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 MIR6740-201ENST00000618268 113 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 AC132825.6-201ENST00000638861 357 ntBASIC0.83□□□□□ -2.28
ZIM3Q96PE6 RNU6-369P-201ENST00000362515 102 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 RNU1-124P-201ENST00000363861 145 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.261-201ENST00000364631 102 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 SNORA1.1-201ENST00000364671 133 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 RNU6-580P-201ENST00000365159 107 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 SNORD58C-201ENST00000365223 64 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 MIR563-201ENST00000385080 79 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 SNORD12C-201ENST00000386307 89 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 RNU6-613P-201ENST00000410412 108 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 RNY4P20-201ENST00000516678 93 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.712-201ENST00000517011 92 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 MIR3914-2-201ENST00000637339 95 ntBASIC0.82□□□□□ -2.28
ZIM3Q96PE6 SNORA22.1-201ENST00000362701 134 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD115-2-201ENST00000362842 82 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.298-201ENST00000364960 107 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD115-20-201ENST00000365099 82 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU6-690P-201ENST00000365242 106 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD116-14-201ENST00000383894 92 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD116-17-201ENST00000383929 92 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU6-80P-201ENST00000384195 107 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.454-201ENST00000384224 113 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD116-15-201ENST00000384445 92 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU6-342P-201ENST00000384521 104 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORD116-19-201ENST00000384729 92 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 SNORA19-201ENST00000384737 128 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU6-482P-201ENST00000391068 107 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 MTATP6P21-201ENST00000440681 189 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU6-1211P-201ENST00000459179 105 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 RNU7-21P-201ENST00000459430 62 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 MIR4305-201ENST00000583252 102 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 AL137067.1-201ENST00000615933 120 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 TUG1_4.1-201ENST00000619464 181 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 AC027335.2-201ENST00000624030 375 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 AC091895.1-201ENST00000624494 256 ntBASIC0.81□□□□□ -2.28
ZIM3Q96PE6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZIM3Q96PE6 MIR103A2-201ENST00000362154 78 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.127-201ENST00000363386 109 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.353-201ENST00000365440 108 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 RNU6-22P-201ENST00000384355 107 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.563-201ENST00000384707 108 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 AC107297.1-201ENST00000459991 176 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 AC133485.4-201ENST00000561835 220 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 AC138907.4-201ENST00000570107 226 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 SEPT14P17-201ENST00000617978 177 ntBASIC0.8□□□□□ -2.28
ZIM3Q96PE6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
ZIM3Q96PE6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.79□□□□□ -2.28
ZIM3Q96PE6 MIR377-201ENST00000362145 69 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 MIR30D-201ENST00000362283 70 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.140-201ENST00000363474 103 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 RNU6-1168P-201ENST00000390831 104 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 RNU7-164P-201ENST00000459221 62 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
ZIM3Q96PE6 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 AC021443.1-201ENST00000604478 211 ntBASIC0.79□□□□□ -2.28
ZIM3Q96PE6 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RNU6-647P-201ENST00000364243 107 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.531-201ENST00000384589 121 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RNU6-205P-201ENST00000390858 107 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RPL39P39-201ENST00000455840 151 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 snoU13.2-201ENST00000459201 104 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 AC113410.1-201ENST00000505029 247 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RNU6-1333P-201ENST00000516162 93 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 SNORD33.1-201ENST00000516213 88 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 MIR548AE2-201ENST00000583456 67 ntBASIC0.78□□□□□ -2.28
ZIM3Q96PE6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 RNA5SP205-201ENST00000364653 136 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 RNU6-392P-201ENST00000364926 101 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 Y_RNA.327-201ENST00000365201 102 ntBASIC0.77□□□□□ -2.29
ZIM3Q96PE6 SNORD18B-201ENST00000365659 72 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms