Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPS3AP52-201ENST00000435639 297 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 AC138305.3-201ENST00000624988 240 ntBASIC-1.35□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 SNORD64-201ENST00000386683 67 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 MIR548K-201ENST00000408406 116 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AP000533.3-201ENST00000447704 118 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AC040926.1-201ENST00000530195 238 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AC024909.2-201ENST00000553035 286 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 MIR4500-201ENST00000579472 76 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AC005899.2-201ENST00000584353 90 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 MIR4324-201ENST00000584846 72 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 AC013791.1-201ENST00000616619 62 ntBASIC-1.36□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 RNU6-484P-201ENST00000384016 107 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 MT-TY-201ENST00000387409 66 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 MIR548F5-201ENST00000408421 86 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 MIR1265-201ENST00000408444 86 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.37□□□□□ -2.63
AP1S3Q96PC3 SNORD115-25-201ENST00000362619 82 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 RNU6-593P-201ENST00000364716 112 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 SNORD115-35-201ENST00000365122 82 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR519A1-201ENST00000385257 85 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 SNORD63B-201ENST00000411005 70 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 AC016907.1-201ENST00000419483 435 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 AC096644.2-201ENST00000429278 159 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MTND1P34-201ENST00000438556 671 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 AC244090.1-201ENST00000441884 93 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 RNU7-106P-201ENST00000459514 67 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 RNU6-764P-201ENST00000516396 105 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR378F-201ENST00000578143 78 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR4724-201ENST00000579485 89 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR3129-201ENST00000581095 76 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 AL669831.3-213ENST00000636676 183 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR1321-201ENST00000637766 79 ntBASIC-1.38□□□□□ -2.63
AP1S3Q96PC3 MIR367-201ENST00000362299 68 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 RNU4-10P-201ENST00000364383 140 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 RNU6-259P-201ENST00000383999 107 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 RNU4-70P-201ENST00000384579 139 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 U2.1-201ENST00000618978 145 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 MIR6738-201ENST00000619620 64 ntBASIC-1.39□□□□□ -2.63
AP1S3Q96PC3 SNORD114-10-201ENST00000363409 72 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-973P-201ENST00000364690 107 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-571P-201ENST00000384128 107 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-937P-201ENST00000384325 106 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-476P-201ENST00000384726 107 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 AC006362.1-201ENST00000567392 174 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 MIR548AX-201ENST00000580117 73 ntBASIC-1.4□□□□□ -2.63
AP1S3Q96PC3 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 SNORA51.5-201ENST00000384126 131 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 RNU2-66P-201ENST00000410650 161 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 MIR2113-201ENST00000459007 91 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 MIR1270-201ENST00000459320 83 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 RPS29P25-201ENST00000481709 171 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 RNU6-126P-201ENST00000516685 103 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 AC144568.1-201ENST00000520139 137 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 AC140658.3-201ENST00000567603 271 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 MIR5692C2-201ENST00000577959 77 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.41□□□□□ -2.64
AP1S3Q96PC3 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 MTND3P8-201ENST00000412909 339 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 SNRPGP8-201ENST00000454064 226 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 MRPS35P2-201ENST00000508242 191 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 RNA5SP33-201ENST00000516687 98 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 AC097639.2-201ENST00000603159 172 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 PART1_1.1-201ENST00000611761 217 ntBASIC-1.42□□□□□ -2.64
AP1S3Q96PC3 AC093783.1-201ENST00000612976 329 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms