Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 SCARNA17-201ENST00000516183 144 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 MIR5692C2-201ENST00000577959 77 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 MIR548AX-201ENST00000580117 73 ntBASIC-1.58□□□□□ -2.66
CCDC42Q96M95 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.58□□□□□ -2.66
CCDC42Q96M95 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU6-154P-201ENST00000384306 106 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU6-510P-201ENST00000391239 108 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU2-55P-201ENST00000411146 174 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 AC093423.1-201ENST00000440817 142 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU6-764P-201ENST00000516396 105 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNA5SP153-201ENST00000516498 76 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 RNU7-137P-201ENST00000516788 62 ntBASIC-1.59□□□□□ -2.66
CCDC42Q96M95 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 AC040926.1-201ENST00000530195 238 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 AC024909.2-201ENST00000553035 286 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 MIR5688-201ENST00000580619 83 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 MIR548AE1-201ENST00000583292 70 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 AC097639.2-201ENST00000603159 172 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.6□□□□□ -2.67
CCDC42Q96M95 SNORD114-15-201ENST00000364687 72 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 RNU6-484P-201ENST00000384016 107 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 RNU6-937P-201ENST00000384325 106 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 MIR526A2-201ENST00000390198 65 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 SNORA53-201ENST00000391141 249 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 MTND1P34-201ENST00000438556 671 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.61□□□□□ -2.67
CCDC42Q96M95 VN1R91P-201ENST00000594377 169 ntBASIC-1.61□□□□□ -2.67
CCDC42Q96M95 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 MIR519A1-201ENST00000385257 85 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 SNORD38.3-201ENST00000516599 73 ntBASIC-1.62□□□□□ -2.67
CCDC42Q96M95 RNY4P14-201ENST00000363656 96 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 MIR519E-201ENST00000385075 84 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 SEPT14P8-201ENST00000508026 178 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 RNU7-70P-201ENST00000516941 66 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 AP000676.1-201ENST00000533307 52 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 C8orf59P2-201ENST00000603441 271 ntBASIC-1.63□□□□□ -2.67
CCDC42Q96M95 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 SNORD114-10-201ENST00000363409 72 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 MTND3P8-201ENST00000412909 339 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 AC096644.2-201ENST00000429278 159 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 SNORD67.1-201ENST00000516618 108 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 RNU6-86P-201ENST00000606534 107 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 SNORD113-5-201ENST00000607261 78 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.64□□□□□ -2.67
CCDC42Q96M95 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.64□□□□□ -2.67
CCDC42Q96M95 MIR20A-201ENST00000362279 71 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 MIR617-201ENST00000385030 97 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 MTATP6P19-201ENST00000413797 659 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.65□□□□□ -2.67
CCDC42Q96M95 RNA5SP395-201ENST00000516567 118 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 RNU6-314P-201ENST00000516574 104 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 AL121655.1-201ENST00000605811 308 ntBASIC-1.65□□□□□ -2.67
CCDC42Q96M95 SNORD114-25-201ENST00000363742 72 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 MIR4460-201ENST00000577862 86 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 MIR3129-201ENST00000581095 76 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 AC007485.1-201ENST00000616755 206 ntBASIC-1.66□□□□□ -2.68
CCDC42Q96M95 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 RNU4-16P-201ENST00000364737 141 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 AC099799.1-201ENST00000439809 192 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 MRPS35P2-201ENST00000508242 191 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 RNU6-506P-201ENST00000516553 94 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 MIR548AG2-201ENST00000581228 64 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 AL359881.1-201ENST00000602916 267 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 AC011603.4-201ENST00000611325 277 ntBASIC-1.67□□□□□ -2.68
CCDC42Q96M95 MTND5P18-201ENST00000445624 1801 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 MIR548I2-201ENST00000408348 149 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 RNU6-721P-201ENST00000410155 105 ntBASIC-1.68□□□□□ -2.68
CCDC42Q96M95 RNU7-55P-201ENST00000459426 62 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms