Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
USP47Q96K76 MIR4752-201ENST00000579672 72 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.24□□□□□ -2.45
USP47Q96K76 SNORA63.7-201ENST00000365579 123 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 SNORA1-201ENST00000384107 130 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 AC096949.1-201ENST00000412047 152 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 SNRPGP8-201ENST00000454064 226 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 MTND4LP30-201ENST00000454092 297 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 SNORA27.4-201ENST00000516650 95 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
USP47Q96K76 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 RNU6-290P-201ENST00000365212 101 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 RNU6-326P-201ENST00000365480 107 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 MIR626-201ENST00000385032 94 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 SNORA53-201ENST00000391141 249 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 AL731563.1-201ENST00000442202 214 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 RPS29P8-201ENST00000445109 171 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.26□□□□□ -2.45
USP47Q96K76 SNORA25.16-201ENST00000516741 121 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 AC037487.3-201ENST00000606668 112 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 AL596211.1-201ENST00000569873 2277 ntBASIC-0.26□□□□□ -2.45
USP47Q96K76 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 RNU6-484P-201ENST00000384016 107 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 RNU6-949P-201ENST00000384040 107 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 RNU6-929P-201ENST00000384429 107 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 RNA5SP153-201ENST00000516498 76 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 MIR376A2-201ENST00000636782 80 ntBASIC-0.27□□□□□ -2.45
USP47Q96K76 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 MT-TT-201ENST00000387460 66 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 RNU6-121P-201ENST00000410525 99 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 RBMX2P4-201ENST00000441256 376 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.28□□□□□ -2.45
USP47Q96K76 AC091932.4-201ENST00000623386 200 ntBASIC-0.28□□□□□ -2.45
USP47Q96K76 SNORA20-201ENST00000384662 132 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 MIR892B-201ENST00000401279 77 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 MIR548H2-201ENST00000408874 88 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 MTND4P19-201ENST00000446659 478 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 RNU6-782P-201ENST00000516852 104 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 MIR4743-201ENST00000584576 69 ntBASIC-0.29□□□□□ -2.46
USP47Q96K76 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 RNU6-450P-201ENST00000364654 107 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 RNU6-823P-201ENST00000391042 103 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 RNU6-875P-201ENST00000516488 106 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 AC138869.1-201ENST00000568623 124 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 MIR3129-201ENST00000581095 76 ntBASIC-0.3□□□□□ -2.46
USP47Q96K76 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNA5SP245-201ENST00000364239 121 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNU6-652P-201ENST00000365488 107 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNU6-211P-201ENST00000384047 107 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNA5SP451-201ENST00000410588 110 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 AC090971.5-201ENST00000621102 293 ntBASIC-0.31□□□□□ -2.46
USP47Q96K76 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 SNORA18-201ENST00000384416 132 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 MIR1252-201ENST00000408861 65 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNA5SP67-201ENST00000516422 131 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 SNORA22.1-201ENST00000362701 134 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNY1P13-201ENST00000365030 105 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU6-756P-201ENST00000383997 107 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNY3P5-201ENST00000384127 102 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU6-101P-201ENST00000410323 104 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 SNORA40.15-201ENST00000516884 107 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 DEFB131E-201ENST00000532329 154 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 MIR5197-201ENST00000583721 112 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 AC097639.2-201ENST00000603159 172 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 RNU1-29P-201ENST00000606574 126 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 AC021613.1-201ENST00000623880 111 ntBASIC-0.32□□□□□ -2.46
USP47Q96K76 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 snoU13.11-201ENST00000459219 104 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 RNU7-159P-201ENST00000459284 62 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
USP47Q96K76 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 RNU6-770P-201ENST00000363929 105 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 AL606845.1-201ENST00000404881 255 ntBASIC-0.34□□□□□ -2.46
USP47Q96K76 RNA5SP266-201ENST00000410273 108 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms