Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
SH3RF3Q8TEJ3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SH3RF3Q8TEJ3 ICE2P2-201ENST00000483823 2787 ntBASIC2.14□□□□□ -2.07
SH3RF3Q8TEJ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-776P-201ENST00000364403 104 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.247-201ENST00000364500 92 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 SNORA16.1-201ENST00000364597 132 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1022P-201ENST00000365049 104 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNA5SP190-201ENST00000365222 118 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 SNORD58A-201ENST00000383875 65 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 SNORD38C-201ENST00000384381 69 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 AC015922.2-201ENST00000435593 184 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 RNU7-113P-201ENST00000459273 62 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 AC108729.3-201ENST00000513484 108 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.94-201ENST00000363068 106 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 RNY1P4-201ENST00000384595 115 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1006P-201ENST00000516998 103 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 AC027279.3-201ENST00000625055 122 ntBASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SH3RF3Q8TEJ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.96-201ENST00000363092 109 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-163P-201ENST00000384396 106 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 U8.15-201ENST00000390947 134 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 STAG3L5P-204ENST00000443759 179 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 AC245517.4-201ENST00000448601 281 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 UBL5P1-201ENST00000507979 193 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 RNA5SP445-201ENST00000515889 115 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 MIR548BB-201ENST00000626714 66 ntBASIC2.11□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.426-201ENST00000384068 113 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 AC090844.1-201ENST00000422019 156 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 RNA5SP33-201ENST00000516687 98 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 MIR4439-201ENST00000583746 80 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 AP000942.3-201ENST00000603702 160 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 MIR376B-201ENST00000614515 100 ntBASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SH3RF3Q8TEJ3 SNORA22.1-201ENST00000362701 134 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-509P-201ENST00000363519 107 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 RNU6-652P-201ENST00000365488 107 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 Y_RNA.430-201ENST00000384081 110 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 SNORA24-201ENST00000384096 131 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 MIR1267-201ENST00000408723 78 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 AC108667.1-201ENST00000428618 249 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 SEPT14P17-201ENST00000617978 177 ntBASIC2.09□□□□□ -2.07
SH3RF3Q8TEJ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 SNORD116-10-201ENST00000363791 102 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 Y_RNA.316-201ENST00000365118 111 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-913P-201ENST00000390913 95 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 U8.16-201ENST00000391279 133 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 Y_RNA.611-201ENST00000410682 108 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 HSPE1P9-201ENST00000440046 311 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4662A-201ENST00000637499 67 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
SH3RF3Q8TEJ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-633P-201ENST00000362612 103 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-833P-201ENST00000363486 107 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-424P-201ENST00000384367 105 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 AC073261.1-201ENST00000429409 121 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 MIR4781-201ENST00000585250 76 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 RNU6-86P-201ENST00000606534 107 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 MIR6717-201ENST00000622747 73 ntBASIC2.07□□□□□ -2.08
SH3RF3Q8TEJ3 AL512310.12-203ENST00000640543 90 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms