Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 PART1_1.1-201ENST00000611761 217 ntBASIC-0.68□□□□□ -2.52
CCDC112Q8NEF3 MIR6507-201ENST00000613630 70 ntBASIC-0.68□□□□□ -2.52
CCDC112Q8NEF3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.68□□□□□ -2.52
CCDC112Q8NEF3 AC007485.1-201ENST00000616755 206 ntBASIC-0.68□□□□□ -2.52
CCDC112Q8NEF3 AC084368.1-201ENST00000620935 65 ntBASIC-0.68□□□□□ -2.52
CCDC112Q8NEF3 RNA5SP133-201ENST00000363368 119 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 RNU4-10P-201ENST00000364383 140 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 HSPE1P25-201ENST00000455484 251 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 RNU7-79P-201ENST00000516082 62 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 MIR4263-201ENST00000584745 83 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 AC097639.2-201ENST00000603159 172 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 AC133104.2-201ENST00000615272 193 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 AC021613.1-201ENST00000623880 111 ntBASIC-0.69□□□□□ -2.52
CCDC112Q8NEF3 MIR101-2-201ENST00000362195 79 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 SNORA20-201ENST00000384662 132 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 SNORD110-201ENST00000408189 75 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 RNU6-559P-201ENST00000516151 98 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 MIR5197-201ENST00000583721 112 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 AC084782.3-201ENST00000612282 578 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 AC025253.1-201ENST00000613623 543 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.7□□□□□ -2.52
CCDC112Q8NEF3 MTND5P32-201ENST00000560711 1802 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 SNORD113-8-201ENST00000363497 74 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 SNORD81.2-201ENST00000365153 76 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 RNU6-102P-201ENST00000384485 104 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 BX276092.1-201ENST00000427368 251 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 AC074198.2-201ENST00000508153 258 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 RNA5SP153-201ENST00000516498 76 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 SNORD58B-201ENST00000607313 66 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 AL590491.3-201ENST00000610731 82 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC112Q8NEF3 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 AC006210.1-201ENST00000424882 111 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 RNU6-507P-201ENST00000516045 100 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 SNORA25.13-201ENST00000516395 103 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 AL356055.1-201ENST00000602528 446 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 AC113139.1-201ENST00000605049 239 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 AC104985.2-201ENST00000620598 500 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 U6.109-201ENST00000636749 87 ntBASIC-0.72□□□□□ -2.52
CCDC112Q8NEF3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 SNORD116-29-201ENST00000384516 83 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 MIR626-201ENST00000385032 94 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 MIR516B1-201ENST00000385211 90 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 SNRPGP8-201ENST00000454064 226 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 SNORA20.3-201ENST00000516880 132 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 RNU7-35P-201ENST00000517174 62 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 AL138825.1-201ENST00000618587 192 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 AL606534.2-204ENST00000635008 178 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 MTND4LP32-201ENST00000636111 270 ntBASIC-0.73□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 AC080013.6-201ENST00000606185 215 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 AL008718.3-201ENST00000610217 321 ntBASIC-0.74□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 MIR3129-201ENST00000581095 76 ntBASIC-0.75□□□□□ -2.53
CCDC112Q8NEF3 RNU4-90P-201ENST00000362773 141 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 U8.6-201ENST00000364939 135 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 RNU1-115P-201ENST00000365329 160 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 RNY4P36-201ENST00000391116 96 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms