Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SNORD77B-201ENST00000391112 67 ntBASIC1.63□□□□□ -2.15
CPEB3Q8NE35 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
CPEB3Q8NE35 AC141557.1-201ENST00000540982 400 ntBASIC1.63□□□□□ -2.15
CPEB3Q8NE35 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.63□□□□□ -2.15
CPEB3Q8NE35 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 CYP3A52P-201ENST00000563326 91 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.62□□□□□ -2.15
CPEB3Q8NE35 AL096861.1-201ENST00000610899 123 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 Y_RNA.818-201ENST00000618813 71 ntBASIC1.62□□□□□ -2.15
CPEB3Q8NE35 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPEB3Q8NE35 RNU6-1099P-201ENST00000363533 107 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 Y_RNA.155-201ENST00000363632 101 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 Y_RNA.354-201ENST00000365448 111 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 SNORA18-201ENST00000384416 132 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 MIR605-201ENST00000385078 83 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 MIR577-201ENST00000385196 96 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 RNU6-679P-201ENST00000391003 106 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 SUMO2P12-201ENST00000405924 140 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 RNU6-733P-201ENST00000410759 104 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 AC245047.7-201ENST00000440265 293 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 HMGN2P23-201ENST00000456759 269 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 RNU7-35P-201ENST00000517174 62 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.61□□□□□ -2.15
CPEB3Q8NE35 MIR5582-201ENST00000579697 68 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
CPEB3Q8NE35 RNY3P2-201ENST00000362918 102 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 Y_RNA.360-201ENST00000365512 102 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 RNU6-409P-201ENST00000384114 104 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 MIR1302-7-201ENST00000408841 72 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 MIR4694-201ENST00000578534 80 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 AP000942.3-201ENST00000603702 160 ntBASIC1.6□□□□□ -2.15
CPEB3Q8NE35 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CPEB3Q8NE35 U8.13-201ENST00000390842 128 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 RNA5SP445-201ENST00000515889 115 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 SNORA40.13-201ENST00000516379 120 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 RNU6-158P-201ENST00000517104 100 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 DEFB131E-201ENST00000532329 154 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.15
CPEB3Q8NE35 Y_RNA.369-201ENST00000365568 117 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 MIR1289-2-201ENST00000408360 111 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 RNY4P30-201ENST00000410216 95 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 SNORA7.5-201ENST00000410672 110 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 RNU6-521P-201ENST00000516663 105 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 FAM71BP1-201ENST00000604431 523 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 PRELID3BP2-201ENST00000605362 201 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 SNORD38B-202ENST00000625943 69 ntBASIC1.58□□□□□ -2.16
CPEB3Q8NE35 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CPEB3Q8NE35 RNU6-832P-201ENST00000363319 107 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 RNU4-36P-201ENST00000364294 144 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 RNU6-1307P-201ENST00000391012 103 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 AC244023.1-201ENST00000426884 112 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 AC242498.1-201ENST00000604134 111 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CPEB3Q8NE35 MIR4679-1-201ENST00000637619 75 ntBASIC1.57□□□□□ -2.16
CPEB3Q8NE35 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CPEB3Q8NE35 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CPEB3Q8NE35 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 MIR488-201ENST00000365739 83 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.466-201ENST00000384294 113 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.601-201ENST00000410500 113 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 RNU6-1086P-201ENST00000410930 100 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 MTATP8P2-201ENST00000435212 202 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 SCARNA23-201ENST00000516060 130 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 RNU7-79P-201ENST00000516082 62 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 RNU6-1018P-201ENST00000516577 106 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 MIR3198-2-201ENST00000577868 80 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
CPEB3Q8NE35 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CPEB3Q8NE35 RNU6-1313P-201ENST00000362622 102 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.93-201ENST00000363066 109 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.107-201ENST00000363190 121 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 SNORA25.3-201ENST00000363205 127 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 SNORD115-35-201ENST00000365122 82 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 Y_RNA.377-201ENST00000365644 108 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 RNU6-1201P-201ENST00000384227 107 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
CPEB3Q8NE35 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.55□□□□□ -2.16
CPEB3Q8NE35 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms