Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 snoU13.2-201ENST00000459201 104 ntBASIC1.3□□□□□ -2.2
PRPF38AQ8NAV1 MIR4661-201ENST00000582720 75 ntBASIC1.3□□□□□ -2.2
PRPF38AQ8NAV1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 MIR588-201ENST00000384900 83 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 PDCD5P2-201ENST00000507570 312 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 MIR548X2-201ENST00000579776 100 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 MIR6841-201ENST00000637129 72 ntBASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PRPF38AQ8NAV1 RNU6-690P-201ENST00000365242 106 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 Y_RNA.398-201ENST00000383952 99 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 RPS29P28-201ENST00000446439 141 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 RNU6-1212P-201ENST00000517023 104 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 HSPE1P19-201ENST00000603327 295 ntBASIC1.28□□□□□ -2.2
PRPF38AQ8NAV1 RNU6-349P-201ENST00000362402 107 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 RNA5SP237-201ENST00000410414 113 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 AL022718.1-201ENST00000412004 84 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 UBL5P1-201ENST00000507979 193 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 Y_RNA.690-201ENST00000516603 95 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 SNORA4-201ENST00000584302 138 ntBASIC1.27□□□□□ -2.21
PRPF38AQ8NAV1 MIR1-1-201ENST00000362147 71 ntBASIC1.26□□□□□ -2.21
PRPF38AQ8NAV1 RNU4-16P-201ENST00000364737 141 ntBASIC1.26□□□□□ -2.21
PRPF38AQ8NAV1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.26□□□□□ -2.21
PRPF38AQ8NAV1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.26□□□□□ -2.21
PRPF38AQ8NAV1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.26□□□□□ -2.21
PRPF38AQ8NAV1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 RNU6-934P-201ENST00000365154 107 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 RNU6-209P-201ENST00000384118 107 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 SNORD12C-201ENST00000386307 89 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 MT-TF-201ENST00000387314 71 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 AC025627.3-201ENST00000582078 182 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
PRPF38AQ8NAV1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 RNA5SP255-201ENST00000516370 107 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 RNU2-60P-201ENST00000517290 128 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 AC133485.4-201ENST00000561835 220 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 AC138907.4-201ENST00000570107 226 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 MIR6740-201ENST00000618268 113 ntBASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PRPF38AQ8NAV1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 RNA5SP144-201ENST00000410846 116 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 RNU7-197P-201ENST00000458836 62 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 SNORA25.12-201ENST00000516202 82 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 Y_RNA.692-201ENST00000516627 105 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 AL078603.1-201ENST00000603824 313 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 MIR6734-201ENST00000621166 68 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 AC021753.1-201ENST00000635724 168 ntBASIC1.23□□□□□ -2.21
PRPF38AQ8NAV1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 MIR563-201ENST00000385080 79 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 MIR1827-201ENST00000408549 66 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 POLR2J4-204ENST00000418424 324 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 RPS26P5-201ENST00000418544 335 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 RPS29P1-201ENST00000465274 159 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 Y_RNA.757-201ENST00000578934 114 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 AP001340.1-201ENST00000624405 217 ntBASIC1.22□□□□□ -2.21
PRPF38AQ8NAV1 AC010332.2-201ENST00000613083 1904 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 MIR489-201ENST00000384923 84 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 SNORD89-201ENST00000390981 114 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 RPL39P25-201ENST00000449384 154 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 RNU7-113P-201ENST00000459273 62 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 AP001328.1-201ENST00000528550 176 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 MIR4305-201ENST00000583252 102 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-915P-201ENST00000364943 103 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 MIR548I1-201ENST00000408810 149 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 AC113410.1-201ENST00000505029 247 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-240P-201ENST00000516098 97 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 MIR4771-2-201ENST00000577758 74 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 MIR4771-1-201ENST00000582617 74 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 AC021443.1-201ENST00000604478 211 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PRPF38AQ8NAV1 Y_RNA.170-201ENST00000363746 110 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-460P-201ENST00000391158 108 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 SNORD83.1-201ENST00000411362 77 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 RNU7-200P-201ENST00000516105 62 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 MTND5P41-201ENST00000517498 206 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 AL662814.1-201ENST00000617364 121 ntBASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.19□□□□□ -2.22
PRPF38AQ8NAV1 RNY1P11-201ENST00000363759 113 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-309P-201ENST00000364573 106 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 Y_RNA.343-201ENST00000365354 112 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 RNY1P5-201ENST00000383890 115 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 Y_RNA.651-201ENST00000459380 103 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms