Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR6717-201ENST00000622747 73 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 AL162726.3-218ENST00000636401 95 ntBASIC1.73□□□□□ -2.13
SLC44A3Q8N4M1 SNORA22.1-201ENST00000362701 134 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-756P-201ENST00000383997 107 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-42P-201ENST00000384165 107 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 RNU6-905P-201ENST00000384434 107 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 MIR759-201ENST00000390224 91 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 AC009474.2-201ENST00000451383 136 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 RNU7-67P-201ENST00000459003 62 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 AL645939.4-201ENST00000604495 135 ntBASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC44A3Q8N4M1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNA5SP276-201ENST00000362580 94 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-1255P-201ENST00000363434 112 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-60P-201ENST00000364792 103 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 SNORA51.5-201ENST00000384126 131 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-439P-201ENST00000384188 106 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 MIR1302-5-201ENST00000408164 150 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 AC113410.1-201ENST00000505029 247 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU7-43P-201ENST00000516554 64 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.694-201ENST00000516677 117 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 RNU7-6P-201ENST00000516845 62 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 MIR8055-201ENST00000610739 97 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 MIR6504-201ENST00000613520 61 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 AP001318.4-201ENST00000616637 121 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 AC106754.2-201ENST00000623006 233 ntBASIC1.71□□□□□ -2.14
SLC44A3Q8N4M1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 SNORA51.10-201ENST00000384418 136 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 SNORA19.1-201ENST00000410656 129 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 HMGN1P33-201ENST00000432945 451 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.677-201ENST00000516401 85 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 MIR4764-201ENST00000580680 88 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.773-201ENST00000607168 90 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 AC008133.2-201ENST00000624540 351 ntBASIC1.7□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.78-201ENST00000362970 110 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 AL353813.1-201ENST00000440700 253 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 JTBP1-201ENST00000441314 247 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 RNU7-113P-201ENST00000459273 62 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 snoU13.16-201ENST00000459350 104 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-904P-201ENST00000516206 101 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 MIR548AE2-201ENST00000583456 67 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 MIR1255B1-201ENST00000636325 63 ntBASIC1.69□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 MIR590-201ENST00000385008 97 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 SNORD41-201ENST00000386967 70 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-816P-201ENST00000390914 107 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-1268P-201ENST00000391214 107 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-1239P-201ENST00000391310 107 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNA5SP261-201ENST00000410536 106 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNU4-69P-201ENST00000410677 143 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-893P-201ENST00000458841 100 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 AL078603.1-201ENST00000603824 313 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 AL773524.1-201ENST00000614065 229 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 MIR8065-201ENST00000620577 100 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 Z97988.1-201ENST00000637697 135 ntBASIC1.68□□□□□ -2.14
SLC44A3Q8N4M1 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 MIR1912-201ENST00000410389 80 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 RNA5SP220-201ENST00000516298 104 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 MIR3152-201ENST00000579801 74 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 AL513534.2-201ENST00000603836 250 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
SLC44A3Q8N4M1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 RNA5SP57-201ENST00000459463 123 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 RNU7-41P-201ENST00000515917 61 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-158P-201ENST00000517104 100 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 MIR5582-201ENST00000579697 68 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 Y_RNA.818-201ENST00000618813 71 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 MIR4679-1-201ENST00000637619 75 ntBASIC1.66□□□□□ -2.14
SLC44A3Q8N4M1 RNU6-363P-201ENST00000362895 105 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-1113P-201ENST00000384348 107 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 RPL39P25-201ENST00000449384 154 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-109P-201ENST00000516364 107 ntBASIC1.65□□□□□ -2.15
SLC44A3Q8N4M1 RNU6-184P-201ENST00000516514 107 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms