Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR548Z-201ENST00000584743 97 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
SIX5Q8N196 AC019129.1-201ENST00000403786 261 ntBASIC2.47□□□□□ -2.01
SIX5Q8N196 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX5Q8N196 MIR4777-201ENST00000583710 86 ntBASIC2.47□□□□□ -2.01
SIX5Q8N196 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.47□□□□□ -2.01
SIX5Q8N196 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.47□□□□□ -2.01
SIX5Q8N196 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
SIX5Q8N196 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX5Q8N196 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 SNORD114-10-201ENST00000363409 72 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 Y_RNA.164-201ENST00000363709 102 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 SNORD38.1-201ENST00000363863 68 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 Y_RNA.338-201ENST00000365320 114 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-972P-201ENST00000391208 107 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-447P-201ENST00000410293 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-1118P-201ENST00000410382 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-1076P-201ENST00000410397 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-355P-201ENST00000410427 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-791P-201ENST00000410467 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-705P-201ENST00000410601 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-1100P-201ENST00000410691 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-860P-201ENST00000410860 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-1217P-201ENST00000411276 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RNU6-785P-201ENST00000411324 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 RPL39P39-201ENST00000455840 151 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 HMGN2P23-201ENST00000456759 269 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 AC024614.2-201ENST00000577584 372 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 GHRLOS.1-201ENST00000610995 70 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 U6.90-201ENST00000614007 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 MIR376B-201ENST00000614515 100 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 U6.70-201ENST00000620287 104 ntBASIC2.46□□□□□ -2.02
SIX5Q8N196 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX5Q8N196 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIX5Q8N196 RNU6-887P-201ENST00000410660 100 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 AC027119.1-201ENST00000440877 241 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 HSPE1P24-201ENST00000450782 238 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 RPL23AP42-201ENST00000471152 471 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 AC022254.1-201ENST00000567857 235 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 AC105081.1-201ENST00000617727 106 ntBASIC2.45□□□□□ -2.02
SIX5Q8N196 Y_RNA.388-201ENST00000383919 113 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 RNU6-820P-201ENST00000384273 107 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 Y_RNA.467-201ENST00000384297 102 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 MIR17-201ENST00000385012 84 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SIX5Q8N196 AC026436.1-201ENST00000510537 270 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 RNU6-947P-201ENST00000516264 106 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 RN7SKP12-201ENST00000516275 143 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 RNU7-137P-201ENST00000516788 62 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 AC015688.6-201ENST00000577737 104 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 AC062037.1-201ENST00000605302 128 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 MIR8063-201ENST00000621930 81 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
SIX5Q8N196 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SIX5Q8N196 Y_RNA.140-201ENST00000363474 103 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 SNORD38.2-201ENST00000384470 69 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 MIR34C-201ENST00000384831 77 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 AC109327.2-201ENST00000448339 378 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
SIX5Q8N196 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SIX5Q8N196 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SIX5Q8N196 AL596028.1-201ENST00000326971 197 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 MIR494-201ENST00000349529 81 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 Y_RNA.4-201ENST00000362333 112 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 Y_RNA.98-201ENST00000363109 102 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 RNU6-396P-201ENST00000365369 105 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 RNU6-1321P-201ENST00000390905 107 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 RNU6-1307P-201ENST00000391012 103 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 AL445685.2-201ENST00000422551 342 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 RNU7-48P-201ENST00000458875 63 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 UBL5P1-201ENST00000507979 193 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 AC133485.1-201ENST00000567176 124 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 AC141846.1-201ENST00000568348 142 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 MIR4299-201ENST00000577899 72 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 MIR3192-201ENST00000584920 77 ntBASIC2.42□□□□□ -2.02
SIX5Q8N196 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SIX5Q8N196 RNU6-813P-201ENST00000384691 107 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 RNU2-40P-201ENST00000410833 196 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 BTF3P4-201ENST00000418852 495 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 SNORA77B-201ENST00000578179 125 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 AP000753.3-201ENST00000604083 169 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 AL096861.1-201ENST00000610899 123 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 AL662814.1-201ENST00000617364 121 ntBASIC2.41□□□□□ -2.02
SIX5Q8N196 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SIX5Q8N196 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SIX5Q8N196 Y_RNA.247-201ENST00000364500 92 ntBASIC2.4□□□□□ -2.03
SIX5Q8N196 RNY1P13-201ENST00000365030 105 ntBASIC2.4□□□□□ -2.03
SIX5Q8N196 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
SIX5Q8N196 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SIX5Q8N196 Y_RNA.17-201ENST00000362433 111 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 SNORA25.3-201ENST00000363205 127 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 SNORA64-201ENST00000384674 134 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 SPINT5P-201ENST00000448174 155 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 RNA5SP445-201ENST00000515889 115 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 MIR5694-201ENST00000581190 76 ntBASIC2.39□□□□□ -2.03
SIX5Q8N196 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms