Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD67.1-201ENST00000516618 108 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 MIR4764-201ENST00000580680 88 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 U7.4-201ENST00000614961 63 ntBASIC2.78□□□□□ -1.96
RNF135Q8IUD6 RNA5SP276-201ENST00000362580 94 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 RNU6-315P-201ENST00000362666 107 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 SNORD114-30-201ENST00000364448 72 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 Y_RNA.354-201ENST00000365448 111 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 RNU6-203P-201ENST00000384038 104 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF135Q8IUD6 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
RNF135Q8IUD6 Y_RNA.173-201ENST00000363776 113 ntBASIC2.76□□□□□ -1.97
RNF135Q8IUD6 AC090255.1-201ENST00000495779 349 ntBASIC2.76□□□□□ -1.97
RNF135Q8IUD6 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
RNF135Q8IUD6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF135Q8IUD6 Z97988.1-201ENST00000637697 135 ntBASIC2.76□□□□□ -1.97
RNF135Q8IUD6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RNF135Q8IUD6 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 MIR181B2-201ENST00000385004 89 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 MIR520C-201ENST00000385005 87 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 RNU6-1321P-201ENST00000390905 107 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF135Q8IUD6 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF135Q8IUD6 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 RNU2-19P-201ENST00000517288 84 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF135Q8IUD6 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 AC105081.1-201ENST00000617727 106 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 MIR7111-201ENST00000619751 72 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 MIR8065-201ENST00000620577 100 ntBASIC2.75□□□□□ -1.97
RNF135Q8IUD6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RNF135Q8IUD6 RNU6-1086P-201ENST00000410930 100 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 AC004223.1-201ENST00000479840 271 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 RNA5SP458-201ENST00000516188 119 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 AC245884.12-201ENST00000615364 59 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 AC012676.2-201ENST00000619258 186 ntBASIC2.74□□□□□ -1.97
RNF135Q8IUD6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNF135Q8IUD6 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 RNA5SP138-201ENST00000365098 114 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 SNORD38.2-201ENST00000384470 69 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 MIR194-1-201ENST00000384892 85 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 RNU6-129P-201ENST00000391022 107 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 SNORD23.1-201ENST00000408212 104 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 AC114801.3-201ENST00000510231 177 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 RNU7-79P-201ENST00000516082 62 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 RNU7-153P-201ENST00000516455 62 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 RNU7-137P-201ENST00000516788 62 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 AL353997.5-201ENST00000618886 171 ntBASIC2.73□□□□□ -1.97
RNF135Q8IUD6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF135Q8IUD6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RNF135Q8IUD6 SNORD114-10-201ENST00000363409 72 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 RNU6-480P-201ENST00000384332 107 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 AC004965.1-201ENST00000413033 213 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 RNA5SP320-201ENST00000516263 124 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 MTND5P40-201ENST00000559945 246 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 CYP3A52P-201ENST00000563326 91 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF135Q8IUD6 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
RNF135Q8IUD6 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.168-201ENST00000363740 102 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-478P-201ENST00000363904 110 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-447P-201ENST00000410293 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-1118P-201ENST00000410382 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-1076P-201ENST00000410397 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-355P-201ENST00000410427 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-791P-201ENST00000410467 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-519P-201ENST00000410590 108 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-705P-201ENST00000410601 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-1100P-201ENST00000410691 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-860P-201ENST00000410860 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-602P-201ENST00000411155 105 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-1217P-201ENST00000411276 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-785P-201ENST00000411324 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF135Q8IUD6 AL356320.1-201ENST00000429616 163 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 AC087499.7-201ENST00000441958 109 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU7-48P-201ENST00000458875 63 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 AC055731.1-201ENST00000474387 401 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 RNU6-322P-201ENST00000516010 103 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 U6.90-201ENST00000614007 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 U6.70-201ENST00000620287 104 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 U4.3-201ENST00000621047 82 ntBASIC2.71□□□□□ -1.98
RNF135Q8IUD6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
RNF135Q8IUD6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RNF135Q8IUD6 SNORA67.1-201ENST00000364749 141 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 RNU6-590P-201ENST00000365039 107 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 SNORA2B-201ENST00000384583 137 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 MIR653-201ENST00000385279 96 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 SNORA25.13-201ENST00000516395 103 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 MIR4251-201ENST00000635819 61 ntBASIC2.7□□□□□ -1.98
RNF135Q8IUD6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF135Q8IUD6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF135Q8IUD6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms