Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNA5SP465-201ENST00000391195 109 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 UBL5P1-201ENST00000507979 193 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 AC108729.3-201ENST00000513484 108 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 Y_RNA.659-201ENST00000515994 113 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-267P-201ENST00000516714 103 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 MIR5588-201ENST00000581890 63 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 SNORA1.1-201ENST00000364671 133 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 SNORD58A-201ENST00000383875 65 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-242P-201ENST00000384359 107 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 AC090844.1-201ENST00000422019 156 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 RNU7-171P-201ENST00000459581 62 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 MIR4666B-201ENST00000578142 81 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 AC096720.1-201ENST00000604441 183 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 AL512310.12-203ENST00000640543 90 ntBASIC2□□□□□ -2.09
LIMS2Q7Z4I7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
LIMS2Q7Z4I7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 Y_RNA.247-201ENST00000364500 92 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 SNORA32-201ENST00000384072 121 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-813P-201ENST00000384691 107 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 RNU7-35P-201ENST00000517174 62 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 MIR4287-201ENST00000579398 78 ntBASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LIMS2Q7Z4I7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 SNORD116-10-201ENST00000363791 102 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 MIR764-201ENST00000390811 85 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-279P-201ENST00000391297 101 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 snoU13.16-201ENST00000459350 104 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 RNU7-2P-201ENST00000516096 62 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 AC104984.5-201ENST00000586878 94 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 MIR376B-201ENST00000614515 100 ntBASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.98□□□□□ -2.09
LIMS2Q7Z4I7 MIR424-201ENST00000362227 98 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-1163P-201ENST00000364516 107 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 U8.15-201ENST00000390947 134 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 HMGN1P33-201ENST00000432945 451 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 SNORA74.3-201ENST00000517108 154 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 MIR4668-201ENST00000582284 70 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 MIR8065-201ENST00000620577 100 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 Z97988.1-201ENST00000637697 135 ntBASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-342P-201ENST00000384521 104 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 MIR206-201ENST00000384872 86 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 snoU13.23-201ENST00000458863 104 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 snoU13.27-201ENST00000459278 104 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 RNA5SP481-201ENST00000516814 122 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 MIR4709-201ENST00000577272 72 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LIMS2Q7Z4I7 SNORD38.1-201ENST00000363863 68 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 RNU7-193P-201ENST00000516723 65 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 MIR6715A-201ENST00000615929 79 ntBASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LIMS2Q7Z4I7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 RNU6-457P-201ENST00000363999 107 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 Y_RNA.313-201ENST00000365095 103 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 RPL23AP6-201ENST00000446637 472 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 RNU6-86P-201ENST00000606534 107 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 AC103810.7-201ENST00000607821 91 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
LIMS2Q7Z4I7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 Y_RNA.244-201ENST00000364484 109 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 MIR34C-201ENST00000384831 77 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 HMGN2P23-201ENST00000456759 269 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 MIR3124-201ENST00000582636 67 ntBASIC1.93□□□□□ -2.1
LIMS2Q7Z4I7 FAM106DP-201ENST00000586416 501 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms