Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 MIR3925-201ENST00000584674 77 ntBASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 MIR6514-201ENST00000622549 70 ntBASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 snoU18.1-201ENST00000629629 71 ntBASIC-0.58□□□□□ -2.5
SSX9Q7RTT3 MIR101-2-201ENST00000362195 79 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 MIR101-1-201ENST00000362265 75 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 SNORA25.1-201ENST00000362326 128 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 RNU4-58P-201ENST00000363192 141 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 SNORD115-46-201ENST00000390982 71 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 RNU6-976P-201ENST00000516086 111 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 RNA5SP153-201ENST00000516498 76 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 MIR3129-201ENST00000581095 76 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 MIR4493-201ENST00000584016 73 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 MIR4677-201ENST00000584153 80 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 AC021613.1-201ENST00000623880 111 ntBASIC-0.59□□□□□ -2.5
SSX9Q7RTT3 RNA5SP133-201ENST00000363368 119 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 SNORD14C-201ENST00000365382 88 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 AL731563.1-201ENST00000442202 214 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 MTND4LP30-201ENST00000454092 297 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 MIR5197-201ENST00000583721 112 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 AC037487.3-201ENST00000606668 112 ntBASIC-0.6□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 RNU6-702P-201ENST00000364982 107 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 MIR626-201ENST00000385032 94 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 SNRPGP8-201ENST00000454064 226 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 RNU7-104P-201ENST00000459398 79 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 RNU7-70P-201ENST00000516941 66 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 AC138749.4-201ENST00000563970 127 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 AC093783.1-201ENST00000612976 329 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 MTND5P32-201ENST00000560711 1802 ntBASIC-0.61□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 MT-TT-201ENST00000387460 66 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 SNORD126-201ENST00000459475 77 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 SNORD19B-201ENST00000459623 84 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 MIR378D2-201ENST00000580636 98 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 AC097639.2-201ENST00000603159 172 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 AL132765.2-201ENST00000610812 351 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.62□□□□□ -2.51
SSX9Q7RTT3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 SNORA53-201ENST00000391141 249 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 MIR1302-11-201ENST00000408051 138 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 MIR1302-9-201ENST00000408365 138 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 MIR1302-10-201ENST00000408734 138 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 RNU7-79P-201ENST00000516082 62 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 SNORA27.4-201ENST00000516650 95 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 RNU7-161P-201ENST00000517289 62 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 MIR1302-2-201ENST00000607096 138 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 U6.109-201ENST00000636749 87 ntBASIC-0.63□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 RPL21P38-201ENST00000418090 167 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 AC244505.6-201ENST00000452829 130 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 RNU6-897P-201ENST00000517135 105 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 CR383656.4-201ENST00000546909 122 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 AC090574.1-201ENST00000623186 233 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 AC073869.9-201ENST00000641610 120 ntBASIC-0.64□□□□□ -2.51
SSX9Q7RTT3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 RNU6-326P-201ENST00000365480 107 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 RNY3P5-201ENST00000384127 102 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 RNU4-70P-201ENST00000384579 139 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 MIR604-201ENST00000384880 94 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 AC011921.3-201ENST00000605540 361 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 MIR3666-201ENST00000607845 111 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 uc_338.28-201ENST00000612082 187 ntBASIC-0.65□□□□□ -2.51
SSX9Q7RTT3 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 SNORA63.7-201ENST00000365579 123 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 RNU6-35P-201ENST00000384530 107 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
SSX9Q7RTT3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms