Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-613P-201ENST00000410412 108 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 MIR4264-201ENST00000583520 66 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 SEPT14P17-201ENST00000617978 177 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 SNORA18-201ENST00000384416 132 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-342P-201ENST00000384521 104 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 MIR759-201ENST00000390224 91 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-735P-201ENST00000410612 107 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 MIR548AE2-201ENST00000583456 67 ntBASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-1290P-201ENST00000362957 109 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 SNORA32-201ENST00000384072 121 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 MIR548A3-201ENST00000385297 97 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.649-201ENST00000459077 103 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 MTND5P34-201ENST00000568888 325 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 MIR6740-201ENST00000618268 113 ntBASIC1.28□□□□□ -2.2
PTCHD4Q6ZW05 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 Y_RNA.299-201ENST00000364973 94 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 MIR588-201ENST00000384900 83 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 MIR548A1-201ENST00000385041 97 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RNU4-69P-201ENST00000410677 143 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 snoU13.2-201ENST00000459201 104 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 snoU13.26-201ENST00000459452 105 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RN7SL429P-201ENST00000479090 223 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RN7SL489P-201ENST00000486185 223 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RN7SL327P-201ENST00000488659 223 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-6P-201ENST00000516845 62 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 SNORA31.24-201ENST00000517232 57 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 MIR3163-201ENST00000581592 73 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 AL670379.3-201ENST00000605040 251 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 RN7SL853P-201ENST00000617250 223 ntBASIC1.27□□□□□ -2.21
PTCHD4Q6ZW05 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-62P-201ENST00000458856 62 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-21P-201ENST00000459430 62 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTCHD4Q6ZW05 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-476P-201ENST00000384726 107 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 RNA5SP237-201ENST00000410414 113 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-1064P-201ENST00000410626 104 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 MIR1270-201ENST00000459320 83 ntBASIC1.25□□□□□ -2.21
PTCHD4Q6ZW05 Y_RNA.273-201ENST00000364703 102 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-1056P-201ENST00000383996 107 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-1144P-201ENST00000384247 104 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 MIR1261-201ENST00000408659 82 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 Y_RNA.629-201ENST00000411368 105 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-35P-201ENST00000517174 62 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 AC023827.1-201ENST00000569247 97 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 uc_338.6-201ENST00000613544 171 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 AL662814.1-201ENST00000617364 121 ntBASIC1.24□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-834P-201ENST00000362367 110 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 RNY4P6-201ENST00000363667 96 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 MIR563-201ENST00000385080 79 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-1165P-201ENST00000410119 107 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 AC036111.3-201ENST00000526389 112 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 MIR6129-201ENST00000616087 109 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 AC087741.2-201ENST00000619415 172 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 AC008163.1-202ENST00000636004 2889 ntBASIC1.23□□□□□ -2.21
PTCHD4Q6ZW05 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 SNORD116-21-201ENST00000384507 92 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 MIR548D2-201ENST00000384955 97 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 SNORD77B-201ENST00000391112 67 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 RNU6-1086P-201ENST00000410930 100 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 RNU7-79P-201ENST00000516082 62 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 AC007012.1-201ENST00000567192 175 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 AC141846.1-201ENST00000568348 142 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 MIR4303-201ENST00000581299 66 ntBASIC1.22□□□□□ -2.21
PTCHD4Q6ZW05 SNORA67.5-201ENST00000391036 107 ntBASIC1.21□□□□□ -2.22
PTCHD4Q6ZW05 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
PTCHD4Q6ZW05 RNU6-548P-201ENST00000517083 115 ntBASIC1.21□□□□□ -2.22
PTCHD4Q6ZW05 MIR7843-201ENST00000622274 79 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms