Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 MIR3122-201ENST00000577243 73 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 MIR4422-201ENST00000581938 83 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 AL096861.1-201ENST00000610899 123 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 SNORD38B-202ENST00000625943 69 ntBASIC1.98□□□□□ -2.09
RUFY4Q6ZNE9 SNORD115-19-201ENST00000363098 82 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 SNORD115-18-201ENST00000363293 82 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 SNORD115-17-201ENST00000364612 82 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 RNU6-602P-201ENST00000411155 105 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 BTF3P4-201ENST00000418852 495 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 AC245517.4-201ENST00000448601 281 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 RNA5SP33-201ENST00000516687 98 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 RNU7-6P-201ENST00000516845 62 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 MIR3192-201ENST00000584920 77 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 RNU6-94P-201ENST00000607728 107 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 MIR8065-201ENST00000620577 100 ntBASIC1.97□□□□□ -2.09
RUFY4Q6ZNE9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.09
RUFY4Q6ZNE9 RNU6-153P-201ENST00000364422 104 ntBASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 RNU6-1107P-201ENST00000364817 104 ntBASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.323-201ENST00000365157 109 ntBASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 SNORD77B-201ENST00000391112 67 ntBASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 RNU11-2P-201ENST00000516898 142 ntBASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.96□□□□□ -2.1
RUFY4Q6ZNE9 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.309-201ENST00000365046 111 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 MIR934-201ENST00000401241 83 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 RNU6-321P-201ENST00000410912 106 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 AC245047.7-201ENST00000440265 293 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 TRMT112P2-201ENST00000512910 132 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 MIR3937-201ENST00000580135 106 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 AC087741.2-201ENST00000619415 172 ntBASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RUFY4Q6ZNE9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.344-201ENST00000365381 112 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.549-201ENST00000384657 102 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 MIR1912-201ENST00000410389 80 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 MIR3664-201ENST00000579074 99 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 AL359821.1-201ENST00000605519 182 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 AL035470.1-201ENST00000622571 220 ntBASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.94□□□□□ -2.1
RUFY4Q6ZNE9 RNU6-396P-201ENST00000365369 105 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 MIR499A-201ENST00000384903 122 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 RNA5SP445-201ENST00000515889 115 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 AP003716.2-201ENST00000528260 108 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 MIR548AE2-201ENST00000583456 67 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 MIR7111-201ENST00000619751 72 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 AL162726.3-218ENST00000636401 95 ntBASIC1.93□□□□□ -2.1
RUFY4Q6ZNE9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
RUFY4Q6ZNE9 SNORA63.4-201ENST00000362763 126 ntBASIC1.92□□□□□ -2.1
RUFY4Q6ZNE9 SNORA63.5-201ENST00000363548 123 ntBASIC1.92□□□□□ -2.1
RUFY4Q6ZNE9 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
RUFY4Q6ZNE9 SNORA25.9-201ENST00000365087 128 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 RNU6-1014P-201ENST00000383940 103 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 MT-TN-201ENST00000387400 73 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 RNU6-947P-201ENST00000516264 106 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 MIR2115-201ENST00000516657 100 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 AC019176.1-201ENST00000518519 225 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 AC068339.1-201ENST00000526965 141 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 MIR5009-201ENST00000578736 100 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
RUFY4Q6ZNE9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 MIR1302-5-201ENST00000408164 150 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 MIR1302-7-201ENST00000408841 72 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AC090844.1-201ENST00000422019 156 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 RNU7-35P-201ENST00000517174 62 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AL512310.8-201ENST00000550183 120 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AL391516.1-201ENST00000554380 2449 ntBASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RUFY4Q6ZNE9 U8.6-201ENST00000364939 135 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-106P-201ENST00000384405 107 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 AL031737.1-201ENST00000450125 223 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 MIR4264-201ENST00000583520 66 ntBASIC1.89□□□□□ -2.11
RUFY4Q6ZNE9 RNA5SP264-201ENST00000363115 107 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 Y_RNA.163-201ENST00000363702 113 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 RNU6-902P-201ENST00000517212 91 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 MIR8070-201ENST00000616510 88 ntBASIC1.88□□□□□ -2.11
RUFY4Q6ZNE9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 291.7 ms