Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU2-51P-201ENST00000410708 197 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RPS26P48-201ENST00000491713 339 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RNU6-772P-201ENST00000516042 105 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RNU6-479P-201ENST00000516348 105 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RNU6-830P-201ENST00000516353 107 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 AP003484.1-201ENST00000530974 250 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 MIR548AR-201ENST00000582191 57 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
NHLRC1Q6VVB1 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-80P-201ENST00000384195 107 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 U8.17-201ENST00000391292 132 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 AL158147.1-201ENST00000443970 75 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 AC067940.1-201ENST00000458411 300 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 RNU7-45P-201ENST00000459460 63 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 SNORD123-201ENST00000459473 70 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 AC011603.4-201ENST00000611325 277 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 AC134878.1-201ENST00000619901 243 ntBASIC0.9□□□□□ -2.27
NHLRC1Q6VVB1 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-429P-201ENST00000384582 108 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-913P-201ENST00000390913 95 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-1154P-201ENST00000391001 104 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-240P-201ENST00000516098 97 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 SNORD33.1-201ENST00000516213 88 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-126P-201ENST00000516685 103 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 MIR3192-201ENST00000584920 77 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 AL136317.1-201ENST00000612653 226 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 SEPT14P17-201ENST00000617978 177 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 AC091932.4-201ENST00000623386 200 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 MIR3914-2-201ENST00000637339 95 ntBASIC0.89□□□□□ -2.27
NHLRC1Q6VVB1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 MIR96-201ENST00000362288 78 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORD114-26-201ENST00000363543 72 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORA1.2-201ENST00000365189 134 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORD58C-201ENST00000365223 64 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.353-201ENST00000365440 108 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORA26.6-201ENST00000391256 115 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 AC090844.1-201ENST00000422019 156 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 RNU5E-3P-201ENST00000515913 68 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 RNU7-41P-201ENST00000515917 61 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-1258P-201ENST00000516911 111 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.712-201ENST00000517011 92 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.88□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU4-16P-201ENST00000364737 141 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 MIR539-201ENST00000365690 78 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 SNORA24-201ENST00000384096 131 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 SNORA27-201ENST00000384323 126 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.563-201ENST00000384707 108 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 MIR1270-201ENST00000459320 83 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-998P-201ENST00000515894 101 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RN7SKP19-201ENST00000516016 252 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-313P-201ENST00000516317 112 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU2-35P-201ENST00000516446 142 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 Y_RNA.692-201ENST00000516627 105 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 AC022523.2-201ENST00000561045 150 ntBASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.87□□□□□ -2.27
NHLRC1Q6VVB1 MIR342-201ENST00000362212 99 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-34-201ENST00000362441 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-12-201ENST00000362583 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-29-201ENST00000362834 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-9-201ENST00000362912 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-21-201ENST00000362963 81 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-14-201ENST00000363090 81 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-13-201ENST00000363358 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-41-201ENST00000363608 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-11-201ENST00000363616 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-5-201ENST00000363633 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-39-201ENST00000363694 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-4-201ENST00000363810 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-16-201ENST00000363887 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-6-201ENST00000363942 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-42-201ENST00000364273 82 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-15-201ENST00000364809 81 ntBASIC0.86□□□□□ -2.27
NHLRC1Q6VVB1 SNORD115-1-201ENST00000364961 82 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms