Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC023827.1-201ENST00000569247 97 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.67□□□□□ -2.3
ZNF544Q6NX49 MIR3671-201ENST00000580455 88 ntBASIC0.67□□□□□ -2.3
ZNF544Q6NX49 MIR302B-201ENST00000362188 73 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.52-201ENST00000362760 96 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 RNU1-133P-201ENST00000364867 167 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 SNORA2B-201ENST00000384583 137 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 MIR598-201ENST00000384868 97 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 Y_RNA.580-201ENST00000391004 95 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 DNAJC19P2-201ENST00000593340 302 ntBASIC0.66□□□□□ -2.3
ZNF544Q6NX49 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 RNU6-818P-201ENST00000364837 108 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 RNU6-1336P-201ENST00000383886 109 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 PCNPP3-201ENST00000393579 471 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 RNU6-394P-201ENST00000410735 107 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 AC108059.2-201ENST00000434626 151 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 RNU6-94P-201ENST00000607728 107 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 AC021613.1-201ENST00000623880 111 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 MTND5P32-201ENST00000560711 1802 ntBASIC0.65□□□□□ -2.31
ZNF544Q6NX49 MIR342-201ENST00000362212 99 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.251-201ENST00000364551 99 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.272-201ENST00000364696 102 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 RNU6-1335P-201ENST00000365426 107 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.497-201ENST00000384447 98 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 RNU6-205P-201ENST00000390858 107 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR942-201ENST00000401111 86 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR1827-201ENST00000408549 66 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 RNU7-62P-201ENST00000458856 62 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR3152-201ENST00000579801 74 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 AC098479.1-201ENST00000609225 154 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 MIR6844-201ENST00000637122 62 ntBASIC0.64□□□□□ -2.31
ZNF544Q6NX49 RNU6-349P-201ENST00000362402 107 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 RNU6-886P-201ENST00000384319 105 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 MIR18B-201ENST00000454574 71 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 RNU7-45P-201ENST00000459460 63 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AC074198.2-201ENST00000508153 258 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 RNU7-70P-201ENST00000516941 66 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 RNU2-60P-201ENST00000517290 128 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AC011603.4-201ENST00000611325 277 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
ZNF544Q6NX49 MIR3658-201ENST00000636291 56 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 AL596211.1-201ENST00000569873 2277 ntBASIC0.63□□□□□ -2.31
ZNF544Q6NX49 RNY1P6-201ENST00000384193 109 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.555-201ENST00000384673 110 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 MT-TF-201ENST00000387314 71 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 RNU6-893P-201ENST00000458841 100 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF544Q6NX49 AC090425.1-201ENST00000610007 140 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
ZNF544Q6NX49 MIR30D-201ENST00000362283 70 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 SNORA22.1-201ENST00000362701 134 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.120-201ENST00000363304 110 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.466-201ENST00000384294 113 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 SNORD12C-201ENST00000386307 89 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RNU6-1165P-201ENST00000410119 107 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RNU6-588P-201ENST00000410281 105 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RNU6-994P-201ENST00000410507 111 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 MTATP6P21-201ENST00000440681 189 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RNU7-197P-201ENST00000458836 62 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 snoU13.21-201ENST00000459368 105 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.61□□□□□ -2.31
ZNF544Q6NX49 RNY1P11-201ENST00000363759 113 ntBASIC0.6□□□□□ -2.31
ZNF544Q6NX49 SNORA20-201ENST00000384662 132 ntBASIC0.6□□□□□ -2.31
ZNF544Q6NX49 AL603914.1-201ENST00000401964 204 ntBASIC0.6□□□□□ -2.31
ZNF544Q6NX49 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
ZNF544Q6NX49 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
ZNF544Q6NX49 MIR1-1-201ENST00000362147 71 ntBASIC0.59□□□□□ -2.31
ZNF544Q6NX49 Y_RNA.180-201ENST00000363867 113 ntBASIC0.59□□□□□ -2.31
ZNF544Q6NX49 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
ZNF544Q6NX49 RNU6-342P-201ENST00000384521 104 ntBASIC0.59□□□□□ -2.31
ZNF544Q6NX49 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
ZNF544Q6NX49 RNA5SP144-201ENST00000410846 116 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms