Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 SNORD87-201ENST00000364849 89 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 MIR216B-201ENST00000390186 82 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU6-677P-201ENST00000516914 101 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 U2.18-201ENST00000622185 84 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 MIR548AH-201ENST00000637109 76 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU6-117P-201ENST00000365415 107 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU6-696P-201ENST00000390834 107 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU6-893P-201ENST00000458841 100 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-867P-201ENST00000364956 107 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-407P-201ENST00000365280 104 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 SNORA27-201ENST00000384323 126 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AP001836.1-201ENST00000604675 523 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AL157392.4-201ENST00000609756 345 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AL669831.3-213ENST00000636676 183 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-609P-201ENST00000365459 107 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 MTATP6P21-201ENST00000440681 189 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC079140.5-201ENST00000507882 310 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNA5SP135-201ENST00000517019 125 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC124312.5-201ENST00000604451 268 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC245297.2-201ENST00000610119 565 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AL607023.1-201ENST00000620045 248 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-822P-201ENST00000362707 106 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC006435.5-201ENST00000624486 112 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 SNORD115-5-201ENST00000363633 82 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 SNORD115-1-201ENST00000364961 82 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 RNU6-458P-201ENST00000384179 107 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 MIR519A2-201ENST00000384990 87 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 U6.58-201ENST00000613107 107 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC022418.1-201ENST00000624118 445 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 SNORA43.4-201ENST00000629559 138 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 U6.96-201ENST00000636425 70 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 AC007671.2-201ENST00000637344 619 ntBASIC-1.09□□□□□ -2.58
UBR4Q5T4S7 SNORA27.1-201ENST00000362604 124 ntBASIC-1.1□□□□□ -2.58
UBR4Q5T4S7 RNU6-960P-201ENST00000364056 120 ntBASIC-1.1□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.1□□□□□ -2.58
UBR4Q5T4S7 AL031003.1-201ENST00000404229 172 ntBASIC-1.1□□□□□ -2.58
UBR4Q5T4S7 AC073343.1-201ENST00000328239 651 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 SNORA63-201ENST00000363450 132 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 SNORA69-201ENST00000383895 132 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 MIR3941-201ENST00000582572 103 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 SNORA20B-201ENST00000384220 132 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 MIR203A-201ENST00000384836 110 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 RNU7-88P-201ENST00000458752 63 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 RNU6-68P-201ENST00000516576 104 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 AC022616.4-201ENST00000522985 181 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 AL445264.1-201ENST00000621719 171 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 RNU6-340P-201ENST00000364005 107 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 SNORA20.2-201ENST00000383922 131 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 RNU6-559P-201ENST00000516151 98 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 MTND1P5-201ENST00000517906 940 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 DEFB108A-201ENST00000530110 222 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 U6.109-201ENST00000636749 87 ntBASIC-1.1□□□□□ -2.59
UBR4Q5T4S7 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU6-744P-201ENST00000365557 107 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AL033528.1-201ENST00000453780 140 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC091179.3-201ENST00000474761 144 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 FRG2DP-202ENST00000566967 323 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 MIR3920-201ENST00000581751 86 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC103706.2-201ENST00000638080 240 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 SNORA27.2-201ENST00000363365 126 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 MIR519A1-201ENST00000385257 85 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC108729.2-201ENST00000476543 840 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNY1P12-201ENST00000364251 105 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 MIR548Q-201ENST00000408404 100 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC018710.1-201ENST00000506509 158 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 ACA59.1-201ENST00000515966 143 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 MIR548O2-201ENST00000616090 70 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNY1P13-201ENST00000365030 105 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU6-430P-201ENST00000517078 107 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 AC068137.4-201ENST00000638485 296 ntBASIC-1.11□□□□□ -2.59
UBR4Q5T4S7 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms