Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AC244023.1-201ENST00000426884 112 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 RNU7-45P-201ENST00000459460 63 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 RNU6-426P-201ENST00000516464 97 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 MIR2115-201ENST00000516657 100 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AP001328.1-201ENST00000528550 176 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.09□□□□□ -2.24
PDS5AQ29RF7 MIR3133-201ENST00000583157 78 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AC242498.1-201ENST00000604134 111 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 RMST_2.1-201ENST00000617263 136 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AC021613.1-201ENST00000623880 111 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.24
PDS5AQ29RF7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-508P-201ENST00000363231 103 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-915P-201ENST00000364943 103 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.420-201ENST00000384043 110 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 MT-TN-201ENST00000387400 73 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 MIR548M-201ENST00000408260 86 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-613P-201ENST00000410412 108 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-602P-201ENST00000411155 105 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 AC010332.2-201ENST00000613083 1904 ntBASIC1.08□□□□□ -2.24
PDS5AQ29RF7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDS5AQ29RF7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDS5AQ29RF7 RNU6-774P-201ENST00000363238 107 ntBASIC1.07□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
PDS5AQ29RF7 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
PDS5AQ29RF7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.07□□□□□ -2.24
PDS5AQ29RF7 RNU6-893P-201ENST00000458841 100 ntBASIC1.07□□□□□ -2.24
PDS5AQ29RF7 RNA5SP272-201ENST00000516095 111 ntBASIC1.07□□□□□ -2.24
PDS5AQ29RF7 SNORA25.8-201ENST00000364831 128 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 RNU6-580P-201ENST00000365159 107 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 SNORA20-201ENST00000384662 132 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 MIR7-2-201ENST00000384970 110 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
PDS5AQ29RF7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
PDS5AQ29RF7 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 MIR6841-201ENST00000637129 72 ntBASIC1.06□□□□□ -2.24
PDS5AQ29RF7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PDS5AQ29RF7 MTND4LP9-201ENST00000427694 174 ntBASIC1.05□□□□□ -2.24
PDS5AQ29RF7 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
PDS5AQ29RF7 MIR4264-201ENST00000583520 66 ntBASIC1.05□□□□□ -2.24
PDS5AQ29RF7 TUG1_4.1-201ENST00000619464 181 ntBASIC1.05□□□□□ -2.24
PDS5AQ29RF7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
PDS5AQ29RF7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
PDS5AQ29RF7 MIR377-201ENST00000362145 69 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 RNU6-654P-201ENST00000364373 107 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 RNU6-690P-201ENST00000365242 106 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 SNORA40-201ENST00000388090 126 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 RNU6-257P-201ENST00000410238 98 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 POLR2J4-204ENST00000418424 324 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 AC004941.2-201ENST00000427009 228 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 AP000753.3-201ENST00000604083 169 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 U7.2-201ENST00000607576 63 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 AC022709.1-201ENST00000615967 87 ntBASIC1.04□□□□□ -2.24
PDS5AQ29RF7 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 SNORA22.1-201ENST00000362701 134 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 SNORD113.3-201ENST00000364630 78 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 RNU6-187P-201ENST00000384139 106 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 RNA5SP144-201ENST00000410846 116 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 RNU6-240P-201ENST00000516098 97 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
PDS5AQ29RF7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 RNU6-704P-201ENST00000364162 103 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 SUMO1P3-201ENST00000439961 304 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 RNA5SP480-201ENST00000516840 109 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 AC133485.4-201ENST00000561835 220 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 AC138907.4-201ENST00000570107 226 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 MIR4305-201ENST00000583252 102 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.02□□□□□ -2.25
PDS5AQ29RF7 SNORD115-2-201ENST00000362842 82 ntBASIC1.01□□□□□ -2.25
PDS5AQ29RF7 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
PDS5AQ29RF7 RNU4-16P-201ENST00000364737 141 ntBASIC1.01□□□□□ -2.25
PDS5AQ29RF7 SNORD115-20-201ENST00000365099 82 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms