Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 RPL39P39-201ENST00000455840 151 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 AC025166.1-201ENST00000612411 163 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
ATP2B3Q16720 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 SNORA22.1-201ENST00000362701 134 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 Y_RNA.291-201ENST00000364886 113 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 MIRLET7F2-201ENST00000385277 83 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 MIR1185-1-201ENST00000408598 86 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 RNA5SP95-201ENST00000410319 137 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 RNU6-602P-201ENST00000411155 105 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 PRELID3BP2-201ENST00000605362 201 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 MIR6841-201ENST00000637129 72 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 MIR3914-2-201ENST00000637339 95 ntBASIC1.56□□□□□ -2.16
ATP2B3Q16720 RNA5SP205-201ENST00000364653 136 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 RNU6-53P-201ENST00000365367 106 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 Y_RNA.470-201ENST00000384307 117 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 Y_RNA.528-201ENST00000384575 108 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 Y_RNA.712-201ENST00000517011 92 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.55□□□□□ -2.16
ATP2B3Q16720 MTND5P18-201ENST00000445624 1801 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 RNU6-1290P-201ENST00000362957 109 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 RNU6-654P-201ENST00000364373 107 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 SNORD12C-201ENST00000386307 89 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 MIR6078-201ENST00000611069 100 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 MIR8065-201ENST00000620577 100 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 Z97988.1-201ENST00000637697 135 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 AL391516.1-201ENST00000554380 2449 ntBASIC1.54□□□□□ -2.16
ATP2B3Q16720 MIR103A2-201ENST00000362154 78 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 Y_RNA.363-201ENST00000365529 113 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 RPS3AP1-201ENST00000413190 320 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 SNORA31.2-201ENST00000516019 134 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 AP003716.2-201ENST00000528260 108 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
ATP2B3Q16720 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
ATP2B3Q16720 RNA5SP264-201ENST00000363115 107 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 RNU6-205P-201ENST00000390858 107 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AL022718.1-201ENST00000412004 84 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AC244023.1-201ENST00000426884 112 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AL133373.1-201ENST00000497098 94 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 RN7SKP179-201ENST00000516126 217 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 MTND5P34-201ENST00000568888 325 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AL359881.1-201ENST00000602916 267 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 AC242498.1-201ENST00000604134 111 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 MIR8070-201ENST00000616510 88 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 MIR6516-201ENST00000630554 81 ntBASIC1.52□□□□□ -2.17
ATP2B3Q16720 Y_RNA.353-201ENST00000365440 108 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 RNU6-1081P-201ENST00000384537 107 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 RNU6-1237P-201ENST00000384777 107 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 MIR548A1-201ENST00000385041 97 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 RNU7-113P-201ENST00000459273 62 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.51□□□□□ -2.17
ATP2B3Q16720 MIR3152-201ENST00000579801 74 ntBASIC1.51□□□□□ -2.17
ATP2B3Q16720 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATP2B3Q16720 SNORA32-201ENST00000384072 121 ntBASIC1.5□□□□□ -2.17
ATP2B3Q16720 MIR1270-201ENST00000459320 83 ntBASIC1.5□□□□□ -2.17
ATP2B3Q16720 MIR548AE2-201ENST00000583456 67 ntBASIC1.5□□□□□ -2.17
ATP2B3Q16720 uc_338.6-201ENST00000613544 171 ntBASIC1.5□□□□□ -2.17
ATP2B3Q16720 Y_RNA.430-201ENST00000384081 110 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 Y_RNA.531-201ENST00000384589 121 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 SNORA75.2-201ENST00000391138 150 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 SNORA75.3-201ENST00000391231 150 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 AC113410.1-201ENST00000505029 247 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 RNA5SP33-201ENST00000516687 98 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 MIR6129-201ENST00000616087 109 ntBASIC1.49□□□□□ -2.17
ATP2B3Q16720 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.49□□□□□ -2.17
ATP2B3Q16720 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
ATP2B3Q16720 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.49□□□□□ -2.17
ATP2B3Q16720 Y_RNA.330-201ENST00000365230 109 ntBASIC1.48□□□□□ -2.17
ATP2B3Q16720 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
ATP2B3Q16720 SNORD38B-201ENST00000384690 67 ntBASIC1.48□□□□□ -2.17
ATP2B3Q16720 MIR548AI-201ENST00000579940 88 ntBASIC1.48□□□□□ -2.17
ATP2B3Q16720 SNORD38B-202ENST00000625943 69 ntBASIC1.48□□□□□ -2.17
ATP2B3Q16720 RNU6-429P-201ENST00000384582 108 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 Y_RNA.563-201ENST00000384707 108 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 RNA5SP261-201ENST00000410536 106 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 RNA5SP136-201ENST00000410906 107 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 COX6CP6-201ENST00000490840 228 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 MIR6740-201ENST00000618268 113 ntBASIC1.47□□□□□ -2.17
ATP2B3Q16720 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
ATP2B3Q16720 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 Y_RNA.346-201ENST00000365385 112 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 SNORA18-201ENST00000384416 132 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 MIR548A3-201ENST00000385297 97 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 Y_RNA.649-201ENST00000459077 103 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 U6.95-201ENST00000636931 70 ntBASIC1.46□□□□□ -2.18
ATP2B3Q16720 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms