Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC008133.2-201ENST00000624540 351 ntBASIC1.67□□□□□ -2.14
SF3B3Q15393 SNORA63.4-201ENST00000362763 126 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 Y_RNA.213-201ENST00000364178 111 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 RNU6-1190P-201ENST00000410811 104 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.66□□□□□ -2.14
SF3B3Q15393 PDCD5P2-201ENST00000507570 312 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 AC022523.2-201ENST00000561045 150 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 MIR4679-2-201ENST00000578358 77 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 AL020996.3-201ENST00000606617 222 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 MIR6841-201ENST00000637129 72 ntBASIC1.66□□□□□ -2.14
SF3B3Q15393 Y_RNA.116-201ENST00000363292 103 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 RNU6-153P-201ENST00000364422 104 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 Y_RNA.281-201ENST00000364774 94 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 Y_RNA.355-201ENST00000365462 98 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 SNORA51.10-201ENST00000384418 136 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 AL451046.2-201ENST00000403074 277 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 RNU6-955P-201ENST00000410497 104 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 AL022718.1-201ENST00000412004 84 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 snoU13.16-201ENST00000459350 104 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 MIR4422-201ENST00000581938 83 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 MIR6717-201ENST00000622747 73 ntBASIC1.65□□□□□ -2.15
SF3B3Q15393 SNORA22-201ENST00000383907 134 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 Y_RNA.430-201ENST00000384081 110 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 RNA5SP261-201ENST00000410536 106 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 AL512326.2-201ENST00000426359 151 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 RNU6-1258P-201ENST00000516911 111 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 AC004812.1-201ENST00000540773 146 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 MIR3152-201ENST00000579801 74 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 AL513534.2-201ENST00000603836 250 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 MIR8055-201ENST00000610739 97 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 MIR7111-201ENST00000619751 72 ntBASIC1.64□□□□□ -2.15
SF3B3Q15393 AL161722.3-201ENST00000605789 2983 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 RNY4P6-201ENST00000363667 96 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 Y_RNA.508-201ENST00000384502 114 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 Y_RNA.531-201ENST00000384589 121 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 MIR759-201ENST00000390224 91 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 RNU6-893P-201ENST00000458841 100 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
SF3B3Q15393 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 SNORA22.1-201ENST00000362701 134 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 Y_RNA.171-201ENST00000363760 102 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 Y_RNA.549-201ENST00000384657 102 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 HMGN1P33-201ENST00000432945 451 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 RPS23P4-201ENST00000487908 423 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 RNU7-41P-201ENST00000515917 61 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 MIR6078-201ENST00000611069 100 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SF3B3Q15393 AL035470.1-201ENST00000622571 220 ntBASIC1.62□□□□□ -2.15
SF3B3Q15393 SNORD115-2-201ENST00000362842 82 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 Y_RNA.85-201ENST00000363014 111 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 SNORD115-20-201ENST00000365099 82 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 Y_RNA.362-201ENST00000365518 110 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 MIR518E-201ENST00000385252 88 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 SNORD12C-201ENST00000386307 89 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 SNORD111.1-201ENST00000516421 86 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 RNU6-412P-201ENST00000516434 106 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 MIR3163-201ENST00000581592 73 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 MIR4251-201ENST00000635819 61 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 Z97988.1-201ENST00000637697 135 ntBASIC1.61□□□□□ -2.15
SF3B3Q15393 MIR548D2-201ENST00000384955 97 ntBASIC1.6□□□□□ -2.15
SF3B3Q15393 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.6□□□□□ -2.15
SF3B3Q15393 RNU7-113P-201ENST00000459273 62 ntBASIC1.6□□□□□ -2.15
SF3B3Q15393 MIR548AO-201ENST00000579992 96 ntBASIC1.6□□□□□ -2.15
SF3B3Q15393 SNORA1.1-201ENST00000364671 133 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 RNU6-1107P-201ENST00000364817 104 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 Y_RNA.344-201ENST00000365381 112 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 Y_RNA.470-201ENST00000384307 117 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 RPS3AP1-201ENST00000413190 320 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 AC113410.1-201ENST00000505029 247 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.59□□□□□ -2.15
SF3B3Q15393 MIR3192-201ENST00000584920 77 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 AL096861.1-201ENST00000610899 123 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
SF3B3Q15393 MIR96-201ENST00000362288 78 ntBASIC1.58□□□□□ -2.16
SF3B3Q15393 AC087741.2-201ENST00000619415 172 ntBASIC1.58□□□□□ -2.16
SF3B3Q15393 AL589743.1-201ENST00000551932 2712 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 SNORA63.5-201ENST00000363548 123 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 Y_RNA.299-201ENST00000364973 94 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 RNU6-106P-201ENST00000384405 107 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 AC090844.1-201ENST00000422019 156 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 HSPE1P24-201ENST00000450782 238 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 RPL39P34-201ENST00000477141 156 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 RNU7-6P-201ENST00000516845 62 ntBASIC1.57□□□□□ -2.16
SF3B3Q15393 MIR8065-201ENST00000620577 100 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms