Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-1292P-201ENST00000383856 107 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 SEPT7P4-201ENST00000437076 306 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 MIR1273G-201ENST00000577677 100 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 RNU6-797P-201ENST00000363101 109 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 Y_RNA.512-201ENST00000384518 102 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 U8.15-201ENST00000390947 134 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 AL512326.2-201ENST00000426359 151 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 Y_RNA.701-201ENST00000516812 110 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 RNA5SP480-201ENST00000516840 109 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 AC141846.1-201ENST00000568348 142 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 MIR4282-201ENST00000583613 67 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 AC044792.1-201ENST00000593294 196 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 AL365205.2-201ENST00000594586 68 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 MIR6082-201ENST00000613604 109 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 U6.104-201ENST00000637979 90 ntBASIC0.14□□□□□ -2.39
RAB40BQ12829 SNORA22.1-201ENST00000362701 134 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 Y_RNA.416-201ENST00000384014 113 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 MTCYBP6-201ENST00000441810 138 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 SNORA62.5-201ENST00000516634 120 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 RNU6-635P-201ENST00000516651 102 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 AC078938.1-201ENST00000620993 318 ntBASIC0.13□□□□□ -2.39
RAB40BQ12829 RNU6-1099P-201ENST00000363533 107 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 MIR1302-6-201ENST00000408466 90 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 AC021613.1-201ENST00000623880 111 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 MIR6841-201ENST00000637129 72 ntBASIC0.12□□□□□ -2.39
RAB40BQ12829 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
RAB40BQ12829 MIR330-201ENST00000362196 94 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNU6-238P-201ENST00000363313 106 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNU6-103P-201ENST00000363686 107 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 Y_RNA.262-201ENST00000364641 102 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNU4-43P-201ENST00000410628 137 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNA5SP268-201ENST00000516828 124 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 RNU6-765P-201ENST00000516916 99 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 AC023932.2-201ENST00000603176 175 ntBASIC0.11□□□□□ -2.39
RAB40BQ12829 Y_RNA.32-201ENST00000362589 110 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 Y_RNA.174-201ENST00000363781 105 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 RNU6-949P-201ENST00000384040 107 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 Y_RNA.461-201ENST00000384263 103 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 Y_RNA.483-201ENST00000384380 101 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 AL121914.1-201ENST00000450188 156 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 SNORD116-25-201ENST00000516517 92 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 AC112693.2-201ENST00000556538 232 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 MIR4491-201ENST00000581087 68 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 MIR8062-201ENST00000621515 85 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
RAB40BQ12829 RNU6-1229P-201ENST00000364295 107 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 SNORA18-201ENST00000384416 132 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 MT-TW-201ENST00000387382 68 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 MTATP8P1-201ENST00000467115 207 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 RNU6-135P-201ENST00000516769 101 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 AL442067.1-201ENST00000613261 223 ntBASIC0.09□□□□□ -2.4
RAB40BQ12829 RNU4-67P-201ENST00000364569 141 ntBASIC0.08□□□□□ -2.4
RAB40BQ12829 Y_RNA.476-201ENST00000384347 108 ntBASIC0.08□□□□□ -2.4
RAB40BQ12829 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
RAB40BQ12829 MIR4744-201ENST00000581563 82 ntBASIC0.08□□□□□ -2.4
RAB40BQ12829 Y_RNA.54-201ENST00000362766 105 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 RNU4-16P-201ENST00000364737 141 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 RNU6-1227P-201ENST00000383981 107 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 Y_RNA.466-201ENST00000384294 113 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 Y_RNA.515-201ENST00000384535 112 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 RNA5SP127-201ENST00000411051 133 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 AC096949.1-201ENST00000412047 152 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 RNU6-893P-201ENST00000458841 100 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 Y_RNA.697-201ENST00000516776 113 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 MIR378D2-201ENST00000580636 98 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 MIR8087-201ENST00000612745 78 ntBASIC0.07□□□□□ -2.4
RAB40BQ12829 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
RAB40BQ12829 Y_RNA.205-201ENST00000364128 113 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU6-978P-201ENST00000364371 103 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 Y_RNA.352-201ENST00000365439 102 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 Y_RNA.536-201ENST00000384621 113 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 Y_RNA.539-201ENST00000384635 107 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU6-291P-201ENST00000384720 107 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 Y_RNA.604-201ENST00000410574 102 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU5E-9P-201ENST00000411164 104 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 AL358176.2-201ENST00000425769 204 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU6-1153P-201ENST00000516760 105 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 RNU6-1149P-201ENST00000516810 97 ntBASIC0.06□□□□□ -2.4
RAB40BQ12829 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms