Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC124303.1-201ENST00000605703 360 ntBASIC-1.81□□□□□ -2.7
HMGXB3Q12766 AL021707.8-201ENST00000609428 183 ntBASIC-1.81□□□□□ -2.7
HMGXB3Q12766 AC091932.4-201ENST00000623386 200 ntBASIC-1.81□□□□□ -2.7
HMGXB3Q12766 AL669831.3-213ENST00000636676 183 ntBASIC-1.81□□□□□ -2.7
HMGXB3Q12766 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 RNU6-254P-201ENST00000363377 107 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 MIRLET7B-201ENST00000385140 83 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 SNORA53-201ENST00000391141 249 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 MIR548E-201ENST00000408287 88 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.82□□□□□ -2.7
HMGXB3Q12766 RNU7-63P-201ENST00000459054 62 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 RNU6-365P-201ENST00000517113 106 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 AP001542.1-201ENST00000591314 200 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 MIR6773-201ENST00000612812 74 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 AP001506.1-201ENST00000615444 211 ntBASIC-1.82□□□□□ -2.7
HMGXB3Q12766 RNU6-95P-201ENST00000384697 107 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 RNU6-337P-201ENST00000391243 106 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 AC098826.2-201ENST00000452011 651 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 AL033528.1-201ENST00000453780 140 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 SNORD77.4-201ENST00000516158 81 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.83□□□□□ -2.7
HMGXB3Q12766 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.83□□□□□ -2.7
HMGXB3Q12766 SNORD115-33-201ENST00000363723 82 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 MIR216B-201ENST00000390186 82 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 AL365203.2-201ENST00000423444 196 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.84□□□□□ -2.7
HMGXB3Q12766 RNU7-141P-201ENST00000459304 62 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 RNU7-106P-201ENST00000459514 67 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 SNORD67.1-201ENST00000516618 108 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 RNU1-54P-201ENST00000517181 120 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 MIR2355-201ENST00000517199 87 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 AC068339.1-201ENST00000526965 141 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 MIR5701-3-201ENST00000578890 82 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 MIR5701-1-201ENST00000585138 82 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 AC024933.1-201ENST00000608472 348 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 MIR5701-2-201ENST00000615634 82 ntBASIC-1.84□□□□□ -2.7
HMGXB3Q12766 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 SNORD114-4-201ENST00000363962 75 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 AL606845.1-201ENST00000404881 255 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 AL590004.1-201ENST00000405321 300 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 RNU7-87P-201ENST00000459343 62 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.85□□□□□ -2.71
HMGXB3Q12766 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 MIR4308-201ENST00000580634 81 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 AC005014.3-201ENST00000605985 190 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 AL158211.2-201ENST00000607282 395 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 AC027449.1-201ENST00000608890 407 ntBASIC-1.85□□□□□ -2.71
HMGXB3Q12766 RNU6-626P-201ENST00000363354 107 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-164P-201ENST00000364604 103 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 MIR582-201ENST00000365731 98 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-759P-201ENST00000516740 103 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-170P-201ENST00000362832 104 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-144P-201ENST00000383951 107 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 SNORA26.4-201ENST00000391188 123 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 AC024067.1-201ENST00000426199 223 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 AC097510.1-201ENST00000510945 133 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 SNORD63.1-201ENST00000516178 80 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 AC005357.1-201ENST00000588399 301 ntBASIC-1.86□□□□□ -2.71
HMGXB3Q12766 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.87□□□□□ -2.71
HMGXB3Q12766 MIR548H1-201ENST00000408610 102 ntBASIC-1.87□□□□□ -2.71
HMGXB3Q12766 AL359881.1-201ENST00000602916 267 ntBASIC-1.87□□□□□ -2.71
HMGXB3Q12766 MIR548O2-201ENST00000616090 70 ntBASIC-1.87□□□□□ -2.71
HMGXB3Q12766 RNU6-874P-201ENST00000362390 105 ntBASIC-1.88□□□□□ -2.71
HMGXB3Q12766 SNORD115-20-201ENST00000365099 82 ntBASIC-1.88□□□□□ -2.71
HMGXB3Q12766 RNU6-20P-201ENST00000384106 107 ntBASIC-1.88□□□□□ -2.71
HMGXB3Q12766 AL049861.1-201ENST00000603130 150 ntBASIC-1.88□□□□□ -2.71
HMGXB3Q12766 RNA5SP26-201ENST00000362406 119 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 RNU6-208P-201ENST00000362431 107 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 RNU6-801P-201ENST00000364087 105 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 RNU6-746P-201ENST00000384112 109 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 RNA5SP86-201ENST00000390869 98 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 SNORD115-47-201ENST00000391226 86 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.89□□□□□ -2.71
HMGXB3Q12766 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.89□□□□□ -2.71
HMGXB3Q12766 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 AC099654.14-201ENST00000638599 341 ntBASIC-1.9□□□□□ -2.71
HMGXB3Q12766 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 SNORA72.4-201ENST00000384174 132 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 RNU2-66P-201ENST00000410650 161 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 SNORD42A-201ENST00000459584 64 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 MIR4464-201ENST00000580818 92 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 AP000240.1-201ENST00000609910 452 ntBASIC-1.91□□□□□ -2.71
HMGXB3Q12766 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.91□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms