Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Y_RNA.354-201ENST00000365448 111 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 Y_RNA.506-201ENST00000384494 102 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 MIR569-201ENST00000385228 96 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 MIR513C-201ENST00000401352 84 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 PDCD5P2-201ENST00000507570 312 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 Y_RNA.686-201ENST00000516548 134 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.66□□□□□ -2.3
CKAP4Q07065 MIR6740-201ENST00000618268 113 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 AP001340.1-201ENST00000624405 217 ntBASIC0.66□□□□□ -2.3
CKAP4Q07065 SNORA22.1-201ENST00000362701 134 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORD114-27-201ENST00000363766 70 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 RNU6-309P-201ENST00000364573 106 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORD18B-201ENST00000365659 72 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORA2B-201ENST00000384583 137 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORA20-201ENST00000384662 132 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 RNU6-205P-201ENST00000390858 107 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 RNA5SP144-201ENST00000410846 116 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 SNORD124-201ENST00000459577 104 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 Y_RNA.757-201ENST00000578934 114 ntBASIC0.65□□□□□ -2.31
CKAP4Q07065 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 RNU6-460P-201ENST00000391158 108 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 RNU7-62P-201ENST00000458856 62 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 Y_RNA.690-201ENST00000516603 95 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 RNU6-1258P-201ENST00000516911 111 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 MIR3121-201ENST00000579680 77 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 snoU13.31-201ENST00000607291 104 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
CKAP4Q07065 RNU6-369P-201ENST00000362515 102 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 SNORD115-2-201ENST00000362842 82 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU4-16P-201ENST00000364737 141 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 Y_RNA.280-201ENST00000364765 112 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU6-392P-201ENST00000364926 101 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU6-915P-201ENST00000364943 103 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 SNORD115-20-201ENST00000365099 82 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU6-1062P-201ENST00000383908 107 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 Y_RNA.420-201ENST00000384043 110 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 Y_RNA.488-201ENST00000384403 102 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 MIR18B-201ENST00000454574 71 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNA5SP458-201ENST00000516188 119 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 SNORA25.12-201ENST00000516202 82 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 RNU6-94P-201ENST00000607728 107 ntBASIC0.63□□□□□ -2.31
CKAP4Q07065 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.63□□□□□ -2.31
CKAP4Q07065 MIR30D-201ENST00000362283 70 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 RNU6-690P-201ENST00000365242 106 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
CKAP4Q07065 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 RNU6-240P-201ENST00000516098 97 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 MIR4305-201ENST00000583252 102 ntBASIC0.62□□□□□ -2.31
CKAP4Q07065 Y_RNA.568-201ENST00000384742 113 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 MT-TF-201ENST00000387314 71 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 MIR942-201ENST00000401111 86 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AL022718.1-201ENST00000412004 84 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 RNU2-35P-201ENST00000516446 142 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 RNU6-426P-201ENST00000516464 97 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 Y_RNA.692-201ENST00000516627 105 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AP001328.1-201ENST00000528550 176 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AC133485.4-201ENST00000561835 220 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AC138907.4-201ENST00000570107 226 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AC108081.1-201ENST00000604358 221 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AL662814.1-201ENST00000617364 121 ntBASIC0.61□□□□□ -2.31
CKAP4Q07065 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.61□□□□□ -2.31
CKAP4Q07065 AC010332.2-201ENST00000613083 1904 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 Y_RNA.171-201ENST00000363760 102 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 Y_RNA.366-201ENST00000365540 102 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 RNU6-994P-201ENST00000410507 111 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 SNORD83.1-201ENST00000411362 77 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 RNU6-346P-201ENST00000516288 111 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.6□□□□□ -2.31
CKAP4Q07065 AL359821.1-201ENST00000605519 182 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 U7.2-201ENST00000607576 63 ntBASIC0.6□□□□□ -2.31
CKAP4Q07065 MIR373-201ENST00000362273 69 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 RNU6-746P-201ENST00000384112 109 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 Y_RNA.470-201ENST00000384307 117 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 RNU6-342P-201ENST00000384521 104 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 Y_RNA.531-201ENST00000384589 121 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 AL512326.2-201ENST00000426359 151 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 RNU7-113P-201ENST00000459273 62 ntBASIC0.59□□□□□ -2.31
CKAP4Q07065 RNU7-123P-201ENST00000515911 60 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms