Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR5197-201ENST00000583721 112 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
GABPAQ06546 MIR563-201ENST00000385080 79 ntBASIC0.45□□□□□ -2.34
GABPAQ06546 RNU7-70P-201ENST00000516941 66 ntBASIC0.45□□□□□ -2.34
GABPAQ06546 AC008608.1-201ENST00000603910 127 ntBASIC0.45□□□□□ -2.34
GABPAQ06546 AC011921.3-201ENST00000605540 361 ntBASIC0.45□□□□□ -2.34
GABPAQ06546 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
GABPAQ06546 RNU6-1292P-201ENST00000383856 107 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 MIR193B-201ENST00000384907 83 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 MIR548H3-201ENST00000408771 118 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 RNA5SP237-201ENST00000410414 113 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 RPL39P25-201ENST00000449384 154 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 SNORD116-25-201ENST00000516517 92 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 AC091932.4-201ENST00000623386 200 ntBASIC0.44□□□□□ -2.34
GABPAQ06546 MIR30D-201ENST00000362283 70 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 Y_RNA.65-201ENST00000362846 100 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 SNORD27-201ENST00000363981 72 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 SNORA20-201ENST00000384662 132 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 MT-TF-201ENST00000387314 71 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 RNU6-493P-201ENST00000391321 108 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 RNU4-43P-201ENST00000410628 137 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 AL358176.2-201ENST00000425769 204 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
GABPAQ06546 Y_RNA.797-201ENST00000515977 94 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 MIR378D2-201ENST00000580636 98 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 RNU2-4P-201ENST00000606190 192 ntBASIC0.43□□□□□ -2.34
GABPAQ06546 RNU6-578P-201ENST00000390980 103 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.42□□□□□ -2.34
GABPAQ06546 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 AC090897.1-201ENST00000580909 226 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 SNORD92-201ENST00000585078 85 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 AL365205.2-201ENST00000594586 68 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 AL360085.1-201ENST00000604713 532 ntBASIC0.42□□□□□ -2.34
GABPAQ06546 RNU6-694P-201ENST00000364071 147 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 RNU6-923P-201ENST00000364753 107 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 RNY4P28-201ENST00000365281 93 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 RNA5SP117-201ENST00000365294 118 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 RNU6-597P-201ENST00000365620 102 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 Y_RNA.477-201ENST00000384352 108 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 SNORD100-201ENST00000408573 76 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 MIR1273G-201ENST00000577677 100 ntBASIC0.41□□□□□ -2.34
GABPAQ06546 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.4□□□□□ -2.35
GABPAQ06546 MTND2P23-201ENST00000422990 651 ntBASIC0.4□□□□□ -2.35
GABPAQ06546 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
GABPAQ06546 RNU6-327P-201ENST00000516270 127 ntBASIC0.4□□□□□ -2.35
GABPAQ06546 AC092634.7-201ENST00000621022 103 ntBASIC0.4□□□□□ -2.35
GABPAQ06546 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
GABPAQ06546 Y_RNA.430-201ENST00000384081 110 ntBASIC0.39□□□□□ -2.35
GABPAQ06546 MIR1302-3-201ENST00000408128 138 ntBASIC0.39□□□□□ -2.35
GABPAQ06546 RNU4-83P-201ENST00000410863 133 ntBASIC0.39□□□□□ -2.35
GABPAQ06546 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.39□□□□□ -2.35
GABPAQ06546 AL662814.1-201ENST00000617364 121 ntBASIC0.39□□□□□ -2.35
GABPAQ06546 Y_RNA.182-201ENST00000363880 111 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 RNU6-978P-201ENST00000364371 103 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 Y_RNA.556-201ENST00000384677 113 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 Y_RNA.562-201ENST00000384695 113 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 RNA5SP127-201ENST00000411051 133 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 MTND1P19-201ENST00000511780 315 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 SNORA25.12-201ENST00000516202 82 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 AC021613.1-201ENST00000623880 111 ntBASIC0.38□□□□□ -2.35
GABPAQ06546 MIR330-201ENST00000362196 94 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 SNORA22.1-201ENST00000362701 134 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 Y_RNA.626-201ENST00000411288 95 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 MTCYBP9-201ENST00000431021 303 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 MIR3678-201ENST00000578455 94 ntBASIC0.37□□□□□ -2.35
GABPAQ06546 RNU6-403P-201ENST00000363163 104 ntBASIC0.36□□□□□ -2.35
GABPAQ06546 Y_RNA.121-201ENST00000363309 113 ntBASIC0.36□□□□□ -2.35
GABPAQ06546 RNU4-70P-201ENST00000384579 139 ntBASIC0.36□□□□□ -2.35
GABPAQ06546 MIR568-201ENST00000385036 95 ntBASIC0.36□□□□□ -2.35
GABPAQ06546 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
GABPAQ06546 RNU6-1149P-201ENST00000516810 97 ntBASIC0.36□□□□□ -2.35
GABPAQ06546 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
GABPAQ06546 Y_RNA.133-201ENST00000363428 110 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 RNU4-16P-201ENST00000364737 141 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 RNU6-643P-201ENST00000384018 107 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 Y_RNA.539-201ENST00000384635 107 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 Y_RNA.571-201ENST00000384753 98 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 SCARNA15-202ENST00000516881 127 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 AC141846.1-201ENST00000568348 142 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 MIR4308-201ENST00000580634 81 ntBASIC0.35□□□□□ -2.35
GABPAQ06546 Y_RNA.20-201ENST00000362479 113 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 RNA5SP325-201ENST00000363756 130 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 SNORA25.7-201ENST00000364375 127 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 Y_RNA.350-201ENST00000365409 98 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 RNA5SP94-201ENST00000516917 108 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 MIR3128-201ENST00000581957 66 ntBASIC0.34□□□□□ -2.36
GABPAQ06546 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 Y_RNA.13-201ENST00000362403 112 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 Y_RNA.162-201ENST00000363683 102 ntBASIC0.33□□□□□ -2.36
GABPAQ06546 SNORA18-201ENST00000384416 132 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms