Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 Y_RNA.709-201ENST00000516952 92 ntBASIC1.68□□□□□ -2.14
IRF9Q00978 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
IRF9Q00978 MIR548AE2-201ENST00000583456 67 ntBASIC1.68□□□□□ -2.14
IRF9Q00978 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
IRF9Q00978 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
IRF9Q00978 MIR548D2-201ENST00000384955 97 ntBASIC1.67□□□□□ -2.14
IRF9Q00978 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.67□□□□□ -2.14
IRF9Q00978 MIR1185-1-201ENST00000408598 86 ntBASIC1.67□□□□□ -2.14
IRF9Q00978 RNU4-69P-201ENST00000410677 143 ntBASIC1.67□□□□□ -2.14
IRF9Q00978 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.67□□□□□ -2.14
IRF9Q00978 RNU7-6P-201ENST00000516845 62 ntBASIC1.67□□□□□ -2.14
IRF9Q00978 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.67□□□□□ -2.14
IRF9Q00978 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
IRF9Q00978 Y_RNA.362-201ENST00000365518 110 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 PDCD5P2-201ENST00000507570 312 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 RNU11-2P-201ENST00000516898 142 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 MIR4679-2-201ENST00000578358 77 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
IRF9Q00978 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
IRF9Q00978 AC063976.4-201ENST00000421971 163 ntBASIC1.65□□□□□ -2.15
IRF9Q00978 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
IRF9Q00978 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
IRF9Q00978 AL035470.1-201ENST00000622571 220 ntBASIC1.65□□□□□ -2.15
IRF9Q00978 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
IRF9Q00978 Y_RNA.281-201ENST00000364774 94 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 SNORA32-201ENST00000384072 121 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 SNORA18-201ENST00000384416 132 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 RNU6-342P-201ENST00000384521 104 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 Y_RNA.549-201ENST00000384657 102 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 SNORD12C-201ENST00000386307 89 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 RNU6-482P-201ENST00000391068 107 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 RNU6-1054P-201ENST00000411293 104 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 AC244023.1-201ENST00000426884 112 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 RNU6-412P-201ENST00000516434 106 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.64□□□□□ -2.15
IRF9Q00978 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 AP000753.3-201ENST00000604083 169 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 AC242498.1-201ENST00000604134 111 ntBASIC1.64□□□□□ -2.15
IRF9Q00978 Y_RNA.344-201ENST00000365381 112 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 SNORA22-201ENST00000383907 134 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 MT-TN-201ENST00000387400 73 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 SNORD77B-201ENST00000391112 67 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 AC048334.1-201ENST00000477975 159 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.63□□□□□ -2.15
IRF9Q00978 MIR4264-201ENST00000583520 66 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 AC087741.2-201ENST00000619415 172 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 MIR6516-201ENST00000630554 81 ntBASIC1.63□□□□□ -2.15
IRF9Q00978 SNORD115-19-201ENST00000363098 82 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 SNORD115-18-201ENST00000363293 82 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 RNU6-755P-201ENST00000364400 103 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 SNORD115-17-201ENST00000364612 82 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 RNU6-613P-201ENST00000410412 108 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 MIR1270-201ENST00000459320 83 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 SNORA31.2-201ENST00000516019 134 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 AL589743.1-201ENST00000551932 2712 ntBASIC1.62□□□□□ -2.15
IRF9Q00978 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
IRF9Q00978 Y_RNA.85-201ENST00000363014 111 ntBASIC1.61□□□□□ -2.15
IRF9Q00978 SNORA63.5-201ENST00000363548 123 ntBASIC1.61□□□□□ -2.15
IRF9Q00978 snoU13.2-201ENST00000459201 104 ntBASIC1.61□□□□□ -2.15
IRF9Q00978 RNU7-35P-201ENST00000517174 62 ntBASIC1.61□□□□□ -2.15
IRF9Q00978 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
IRF9Q00978 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
IRF9Q00978 MIR377-201ENST00000362145 69 ntBASIC1.6□□□□□ -2.15
IRF9Q00978 RNA5SP237-201ENST00000410414 113 ntBASIC1.6□□□□□ -2.15
IRF9Q00978 Y_RNA.49-201ENST00000362714 112 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RNU1-17P-201ENST00000363022 152 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RNU6-1107P-201ENST00000364817 104 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RNU6-1237P-201ENST00000384777 107 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 MIR588-201ENST00000384900 83 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RNU6-205P-201ENST00000390858 107 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 RPL39P34-201ENST00000477141 156 ntBASIC1.59□□□□□ -2.15
IRF9Q00978 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 RNU6-147P-201ENST00000383983 107 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 RNU6-1086P-201ENST00000410930 100 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 Y_RNA.773-201ENST00000607168 90 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 AL662814.1-201ENST00000617364 121 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 SEPT14P17-201ENST00000617978 177 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 MIR6740-201ENST00000618268 113 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 AL162726.3-218ENST00000636401 95 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 AL161722.3-201ENST00000605789 2983 ntBASIC1.58□□□□□ -2.16
IRF9Q00978 Y_RNA.309-201ENST00000365046 111 ntBASIC1.57□□□□□ -2.16
IRF9Q00978 RNU7-62P-201ENST00000458856 62 ntBASIC1.57□□□□□ -2.16
IRF9Q00978 MIR3613-201ENST00000579844 87 ntBASIC1.57□□□□□ -2.16
IRF9Q00978 FAM71BP1-201ENST00000604431 523 ntBASIC1.57□□□□□ -2.16
IRF9Q00978 MIR1255B1-201ENST00000636325 63 ntBASIC1.57□□□□□ -2.16
IRF9Q00978 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
IRF9Q00978 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.57□□□□□ -2.16
IRF9Q00978 RNU6-616P-201ENST00000384353 107 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 MIR563-201ENST00000385080 79 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 SNORA75.2-201ENST00000391138 150 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 SNORA75.3-201ENST00000391231 150 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 RNA5SP95-201ENST00000410319 137 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 RNU7-79P-201ENST00000516082 62 ntBASIC1.56□□□□□ -2.16
IRF9Q00978 RNA5SP458-201ENST00000516188 119 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms