Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PMCHL1-202ENST00000423102 261 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 AL445193.1-201ENST00000441183 141 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 U8.20-201ENST00000459445 131 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 TRAJ51-201ENST00000504127 63 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 RNU6-507P-201ENST00000516045 100 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 RNU7-13P-201ENST00000516413 62 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 RNU7-30P-201ENST00000516835 62 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 RNU6-699P-201ENST00000517081 110 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
CCL20P78556 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 MIR3688-2-201ENST00000636963 87 ntBASIC-1.04□□□□□ -2.58
CCL20P78556 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.05□□□□□ -2.58
CCL20P78556 AC021146.6-201ENST00000514659 117 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 RNA5SP285-201ENST00000516619 119 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 RNU7-137P-201ENST00000516788 62 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 AC097639.2-201ENST00000603159 172 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 AC133104.2-201ENST00000615272 193 ntBASIC-1.05□□□□□ -2.58
CCL20P78556 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 RNA5SP457-201ENST00000363657 124 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 SNORA53-201ENST00000391141 249 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 AL603914.1-201ENST00000401964 204 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.06□□□□□ -2.58
CCL20P78556 MTND1P29-201ENST00000448112 647 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.06□□□□□ -2.58
CCL20P78556 AC024909.2-201ENST00000553035 286 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 MIR5688-201ENST00000580619 83 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 AC103591.3-201ENST00000608684 209 ntBASIC-1.06□□□□□ -2.58
CCL20P78556 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 MIR613-201ENST00000385248 95 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 SNORD67.1-201ENST00000516618 108 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 RNU6-175P-201ENST00000516896 107 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 MIR3124-201ENST00000582636 67 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 AC069503.3-201ENST00000618674 145 ntBASIC-1.07□□□□□ -2.58
CCL20P78556 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 SNORA32-201ENST00000384072 121 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 SNORD116-1-201ENST00000384335 95 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 MIR9-2-201ENST00000384838 87 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 RNU6-735P-201ENST00000410612 107 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 YWHAEP2-201ENST00000580066 112 ntBASIC-1.08□□□□□ -2.58
CCL20P78556 SNORD113-8-201ENST00000363497 74 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 MIR539-201ENST00000365690 78 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 MT-TQ-201ENST00000387372 72 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
CCL20P78556 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 AC040926.1-201ENST00000530195 238 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 MTND5P40-201ENST00000559945 246 ntBASIC-1.09□□□□□ -2.58
CCL20P78556 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 SNORD114-10-201ENST00000363409 72 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 RNU6-901P-201ENST00000384593 106 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 RNU7-113P-201ENST00000459273 62 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 SNORD116.3-201ENST00000517176 78 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 MIR4493-201ENST00000584016 73 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 AL138825.1-201ENST00000618587 192 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 AP000770.2-201ENST00000623694 100 ntBASIC-1.1□□□□□ -2.59
CCL20P78556 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 RNU6-154P-201ENST00000384306 106 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 RNU6-102P-201ENST00000384485 104 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CCL20P78556 SNRPGP8-201ENST00000454064 226 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 RNA5SP33-201ENST00000516687 98 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 AL359881.1-201ENST00000602916 267 ntBASIC-1.11□□□□□ -2.59
CCL20P78556 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 HSPE1P25-201ENST00000455484 251 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 MIR4500-201ENST00000579472 76 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 MIR548AE1-201ENST00000583292 70 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 PART1_1.1-201ENST00000611761 217 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 U4.5-201ENST00000617137 123 ntBASIC-1.12□□□□□ -2.59
CCL20P78556 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 RNU4-90P-201ENST00000362773 141 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 RNY3P5-201ENST00000384127 102 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 SNORD56B-201ENST00000384713 71 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 MIR224-201ENST00000384889 81 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 RNA5SP144-201ENST00000410846 116 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 RNU6-130P-201ENST00000411112 103 ntBASIC-1.13□□□□□ -2.59
CCL20P78556 AL731563.1-201ENST00000442202 214 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms