Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 AP000648.3-201ENST00000623539 4507 ntBASIC1.99□□□□□ -2.09
NKX3-2P78367 Y_RNA.78-201ENST00000362970 110 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 Y_RNA.299-201ENST00000364973 94 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 Y_RNA.544-201ENST00000384650 113 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 RNA5SP261-201ENST00000410536 106 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 AL161935.2-201ENST00000414627 60 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 AC008133.2-201ENST00000624540 351 ntBASIC1.98□□□□□ -2.09
NKX3-2P78367 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.98□□□□□ -2.09
NKX3-2P78367 RNU6-363P-201ENST00000362895 105 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU6-1131P-201ENST00000364955 107 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 SNORA32-201ENST00000384072 121 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU6-616P-201ENST00000384353 107 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU6-1067P-201ENST00000384752 107 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 MIR520C-201ENST00000385005 87 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 MIR605-201ENST00000385078 83 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 snoU13.16-201ENST00000459350 104 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU7-43P-201ENST00000516554 64 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 AL359821.1-201ENST00000605519 182 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.97□□□□□ -2.09
NKX3-2P78367 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NKX3-2P78367 Y_RNA.155-201ENST00000363632 101 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 RNU4-67P-201ENST00000364569 141 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 MIR488-201ENST00000365739 83 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 RNU6-49P-201ENST00000384256 107 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 Y_RNA.507-201ENST00000384500 99 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NKX3-2P78367 RPS3AP1-201ENST00000413190 320 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 AL353813.1-201ENST00000440700 253 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX3-2P78367 MIR4303-201ENST00000581299 66 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
NKX3-2P78367 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NKX3-2P78367 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NKX3-2P78367 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NKX3-2P78367 RNY1P10-201ENST00000363268 113 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 RNU6-1099P-201ENST00000363533 107 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 SNORA1.1-201ENST00000364671 133 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 RNA5SP259-201ENST00000365541 109 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 RNU7-41P-201ENST00000515917 61 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 DEFB131E-201ENST00000532329 154 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 MIR548AO-201ENST00000579992 96 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 Y_RNA.818-201ENST00000618813 71 ntBASIC1.95□□□□□ -2.1
NKX3-2P78367 Y_RNA.360-201ENST00000365512 102 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 RNU6-409P-201ENST00000384114 104 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 RNU6-342P-201ENST00000384521 104 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 MIR577-201ENST00000385196 96 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NKX3-2P78367 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 SNORA7.5-201ENST00000410672 110 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 RNU6-733P-201ENST00000410759 104 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 AC090844.1-201ENST00000422019 156 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 JTBP1-201ENST00000441314 247 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NKX3-2P78367 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
NKX3-2P78367 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NKX3-2P78367 RNY3P2-201ENST00000362918 102 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 RNU6-679P-201ENST00000391003 106 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 SNORD77B-201ENST00000391112 67 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 MTATP8P2-201ENST00000435212 202 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX3-2P78367 RNU6-970P-201ENST00000516312 107 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 MIR8065-201ENST00000620577 100 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 Z97988.1-201ENST00000637697 135 ntBASIC1.93□□□□□ -2.1
NKX3-2P78367 RNU4-36P-201ENST00000364294 144 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 MIR1287-201ENST00000408492 90 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 RNU6-602P-201ENST00000411155 105 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 AC245047.7-201ENST00000440265 293 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX3-2P78367 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 MIR4251-201ENST00000635819 61 ntBASIC1.92□□□□□ -2.1
NKX3-2P78367 RNU6-832P-201ENST00000363319 107 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 RNY1P7-201ENST00000384743 110 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 AL451046.2-201ENST00000403074 277 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 RNU6-322P-201ENST00000516010 103 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 RNU6-521P-201ENST00000516663 105 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 RNU6-922P-201ENST00000516753 99 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 MIR4694-201ENST00000578534 80 ntBASIC1.91□□□□□ -2.1
NKX3-2P78367 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX3-2P78367 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.1
NKX3-2P78367 RNU6-294P-201ENST00000364999 102 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 SNORA18-201ENST00000384416 132 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 SCARNA23-201ENST00000516060 130 ntBASIC1.9□□□□□ -2.11
NKX3-2P78367 RNU6-158P-201ENST00000517104 100 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms