Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL121655.1-201ENST00000605811 308 ntBASIC-1.8□□□□□ -2.7
RPS28P62857 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.8□□□□□ -2.7
RPS28P62857 MIR6128-201ENST00000615528 109 ntBASIC-1.8□□□□□ -2.7
RPS28P62857 MIR6874-201ENST00000635894 71 ntBASIC-1.8□□□□□ -2.7
RPS28P62857 AC068137.3-201ENST00000639191 341 ntBASIC-1.8□□□□□ -2.7
RPS28P62857 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 SNORD115-23-201ENST00000364461 82 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 MIR582-201ENST00000365731 98 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 RNU6-746P-201ENST00000384112 109 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 SNORD61-201ENST00000384252 73 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 RNU4-61P-201ENST00000411243 107 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.81□□□□□ -2.7
RPS28P62857 SNORD5.1-201ENST00000458800 75 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 RNU6-983P-201ENST00000516004 103 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 RNU6-273P-201ENST00000516937 96 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 AC100767.1-201ENST00000528178 123 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.81□□□□□ -2.7
RPS28P62857 AC007012.1-201ENST00000567192 175 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 MIR376A2-201ENST00000636782 80 ntBASIC-1.81□□□□□ -2.7
RPS28P62857 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MTND4P28-201ENST00000426217 387 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 AF228730.3-201ENST00000436691 102 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR4441-201ENST00000582623 100 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR1244-1-201ENST00000612829 85 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR1244-3-201ENST00000635744 85 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR1244-2-201ENST00000636449 85 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR1244-4-202ENST00000636813 85 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR6841-201ENST00000637129 72 ntBASIC-1.82□□□□□ -2.7
RPS28P62857 MIR365A-201ENST00000362260 87 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 RNU6-888P-201ENST00000363010 101 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 SNORD18.1-201ENST00000363807 70 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 SNORD78.2-201ENST00000391076 69 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 RNU2-14P-201ENST00000411053 191 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.83□□□□□ -2.7
RPS28P62857 SNORD11.1-201ENST00000459482 85 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 RNA5SP272-201ENST00000516095 111 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 AC098479.1-201ENST00000609225 154 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 AC011476.5-201ENST00000615594 130 ntBASIC-1.83□□□□□ -2.7
RPS28P62857 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 MIR548H1-201ENST00000408610 102 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 SNX3P1X-201ENST00000414887 175 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 AL160004.2-201ENST00000432935 350 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 MIR2053-201ENST00000459295 91 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 RNU7-79P-201ENST00000516082 62 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 RNU6-365P-201ENST00000517113 106 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 MIR4528-201ENST00000577763 90 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 RN7SKP299-201ENST00000606679 301 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 snoR1.1-201ENST00000628177 80 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 MIR198-201ENST00000637333 62 ntBASIC-1.84□□□□□ -2.7
RPS28P62857 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 SNORA72.4-201ENST00000384174 132 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 MIR601-201ENST00000385256 79 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 RNU6-466P-201ENST00000391224 103 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 MIR548E-201ENST00000408287 88 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 RNU7-80P-201ENST00000459562 61 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 SNORD77.4-201ENST00000516158 81 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
RPS28P62857 AC107308.1-201ENST00000615897 301 ntBASIC-1.85□□□□□ -2.71
RPS28P62857 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 SNORA51.5-201ENST00000384126 131 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.86□□□□□ -2.71
RPS28P62857 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.86□□□□□ -2.71
RPS28P62857 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 RNU6-126P-201ENST00000516685 103 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 AL021707.8-201ENST00000609428 183 ntBASIC-1.86□□□□□ -2.71
RPS28P62857 RNA5SP26-201ENST00000362406 119 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 RNU6-704P-201ENST00000364162 103 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 SEPT14P3-201ENST00000439401 183 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 AL732372.2-207ENST00000445840 183 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 SEPT14P2-201ENST00000453405 183 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 MIR2113-201ENST00000459007 91 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 SEPT14P4-201ENST00000513445 186 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 FO082796.1-201ENST00000523795 183 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 AC091932.4-201ENST00000623386 200 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 MIR3662-201ENST00000637030 95 ntBASIC-1.87□□□□□ -2.71
RPS28P62857 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 SNORD2-201ENST00000459163 69 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 SNORD63.1-201ENST00000516178 80 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 MIR4464-201ENST00000580818 92 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 MIR3942-201ENST00000585264 109 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 AL669831.3-213ENST00000636676 183 ntBASIC-1.88□□□□□ -2.71
RPS28P62857 RNU6-524P-201ENST00000384270 107 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms