Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
USP46P62068 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
USP46P62068 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
USP46P62068 AC242498.1-201ENST00000604134 111 ntBASIC2.84□□□□□ -1.95
USP46P62068 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
USP46P62068 U6.109-201ENST00000636749 87 ntBASIC2.84□□□□□ -1.95
USP46P62068 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
USP46P62068 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP46P62068 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
USP46P62068 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
USP46P62068 MIR26A1-201ENST00000362205 77 ntBASIC2.83□□□□□ -1.96
USP46P62068 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
USP46P62068 RNA5SP133-201ENST00000363368 119 ntBASIC2.83□□□□□ -1.96
USP46P62068 RNU4-83P-201ENST00000410863 133 ntBASIC2.83□□□□□ -1.96
USP46P62068 snoU13.2-201ENST00000459201 104 ntBASIC2.83□□□□□ -1.96
USP46P62068 RNU7-193P-201ENST00000516723 65 ntBASIC2.83□□□□□ -1.96
USP46P62068 RNU6-922P-201ENST00000516753 99 ntBASIC2.83□□□□□ -1.96
USP46P62068 PRELID3BP2-201ENST00000605362 201 ntBASIC2.83□□□□□ -1.96
USP46P62068 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USP46P62068 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USP46P62068 MIR196B-201ENST00000384852 84 ntBASIC2.82□□□□□ -1.96
USP46P62068 MIR194-1-201ENST00000384892 85 ntBASIC2.82□□□□□ -1.96
USP46P62068 MIR513A1-201ENST00000385138 129 ntBASIC2.82□□□□□ -1.96
USP46P62068 AC138749.4-201ENST00000563970 127 ntBASIC2.82□□□□□ -1.96
USP46P62068 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.82□□□□□ -1.96
USP46P62068 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.82□□□□□ -1.96
USP46P62068 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
USP46P62068 SNORD4B-201ENST00000459083 72 ntBASIC2.81□□□□□ -1.96
USP46P62068 SNORA25.13-201ENST00000516395 103 ntBASIC2.81□□□□□ -1.96
USP46P62068 RNU6-850P-201ENST00000516934 103 ntBASIC2.81□□□□□ -1.96
USP46P62068 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.81□□□□□ -1.96
USP46P62068 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
USP46P62068 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
USP46P62068 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USP46P62068 Y_RNA.565-201ENST00000384719 101 ntBASIC2.8□□□□□ -1.96
USP46P62068 RNU6-129P-201ENST00000391022 107 ntBASIC2.8□□□□□ -1.96
USP46P62068 SNRPGP12-201ENST00000449481 213 ntBASIC2.8□□□□□ -1.96
USP46P62068 AC023790.1-201ENST00000482174 347 ntBASIC2.8□□□□□ -1.96
USP46P62068 AC139453.2-201ENST00000487255 133 ntBASIC2.8□□□□□ -1.96
USP46P62068 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
USP46P62068 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USP46P62068 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.8□□□□□ -1.96
USP46P62068 AL161722.3-201ENST00000605789 2983 ntBASIC2.79□□□□□ -1.96
USP46P62068 SNORA25.3-201ENST00000363205 127 ntBASIC2.79□□□□□ -1.96
USP46P62068 BX276092.1-201ENST00000427368 251 ntBASIC2.79□□□□□ -1.96
USP46P62068 MIR3192-201ENST00000584920 77 ntBASIC2.79□□□□□ -1.96
USP46P62068 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.79□□□□□ -1.96
USP46P62068 AC145423.2-201ENST00000610631 239 ntBASIC2.79□□□□□ -1.96
USP46P62068 WWP1P1-201ENST00000466609 2769 ntBASIC2.79□□□□□ -1.96
USP46P62068 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
USP46P62068 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP46P62068 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP46P62068 SNORD41-201ENST00000386967 70 ntBASIC2.78□□□□□ -1.96
USP46P62068 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
USP46P62068 AL512598.1-201ENST00000610158 273 ntBASIC2.78□□□□□ -1.96
USP46P62068 FO624990.1-201ENST00000636373 85 ntBASIC2.78□□□□□ -1.96
USP46P62068 Y_RNA.119-201ENST00000363301 96 ntBASIC2.77□□□□□ -1.97
USP46P62068 RNU6-1229P-201ENST00000364295 107 ntBASIC2.77□□□□□ -1.97
USP46P62068 RNU6-396P-201ENST00000365369 105 ntBASIC2.77□□□□□ -1.97
USP46P62068 RNU1-52P-201ENST00000384190 164 ntBASIC2.77□□□□□ -1.97
USP46P62068 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
USP46P62068 SNORA4-201ENST00000584302 138 ntBASIC2.77□□□□□ -1.97
USP46P62068 AC067747.1-201ENST00000608026 250 ntBASIC2.77□□□□□ -1.97
USP46P62068 MIR6817-201ENST00000615588 66 ntBASIC2.77□□□□□ -1.97
USP46P62068 MIR6740-201ENST00000618268 113 ntBASIC2.77□□□□□ -1.97
USP46P62068 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
USP46P62068 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
USP46P62068 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP46P62068 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP46P62068 RNU4-82P-201ENST00000362443 140 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNA5SP276-201ENST00000362580 94 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNU6-315P-201ENST00000362666 107 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNU6-205P-201ENST00000390858 107 ntBASIC2.76□□□□□ -1.97
USP46P62068 AL450471.1-201ENST00000447509 127 ntBASIC2.76□□□□□ -1.97
USP46P62068 snoU13.11-201ENST00000459219 104 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNU6-947P-201ENST00000516264 106 ntBASIC2.76□□□□□ -1.97
USP46P62068 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
USP46P62068 AL096861.1-201ENST00000610899 123 ntBASIC2.76□□□□□ -1.97
USP46P62068 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
USP46P62068 RNU6-439P-201ENST00000384188 106 ntBASIC2.75□□□□□ -1.97
USP46P62068 RNU7-85P-201ENST00000458851 63 ntBASIC2.75□□□□□ -1.97
USP46P62068 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
USP46P62068 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.75□□□□□ -1.97
USP46P62068 AP000942.3-201ENST00000603702 160 ntBASIC2.75□□□□□ -1.97
USP46P62068 RNU6-478P-201ENST00000363904 110 ntBASIC2.74□□□□□ -1.97
USP46P62068 RNU6-571P-201ENST00000384128 107 ntBASIC2.74□□□□□ -1.97
USP46P62068 Y_RNA.508-201ENST00000384502 114 ntBASIC2.74□□□□□ -1.97
USP46P62068 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.74□□□□□ -1.97
USP46P62068 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
USP46P62068 JTBP1-201ENST00000441314 247 ntBASIC2.74□□□□□ -1.97
USP46P62068 RNA5SP282-201ENST00000516355 108 ntBASIC2.74□□□□□ -1.97
USP46P62068 AL357312.1-201ENST00000603879 298 ntBASIC2.74□□□□□ -1.97
USP46P62068 U7.4-201ENST00000614961 63 ntBASIC2.74□□□□□ -1.97
USP46P62068 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
USP46P62068 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
USP46P62068 SNORA72.6-201ENST00000384520 129 ntBASIC2.73□□□□□ -1.97
USP46P62068 RNU6-1165P-201ENST00000410119 107 ntBASIC2.73□□□□□ -1.97
USP46P62068 Y_RNA.648-201ENST00000459455 110 ntBASIC2.73□□□□□ -1.97
USP46P62068 AC090255.1-201ENST00000495779 349 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 1903.8 ms