Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
CHMP4BP1P59074 RNA5SP33-201ENST00000516687 98 ntBASIC2.16□□□□□ -2.06
CHMP4BP1P59074 MIR3192-201ENST00000584920 77 ntBASIC2.16□□□□□ -2.06
CHMP4BP1P59074 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.16□□□□□ -2.06
CHMP4BP1P59074 MIR488-201ENST00000365739 83 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 MIR520C-201ENST00000385005 87 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 MIR605-201ENST00000385078 83 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 RPL39P25-201ENST00000449384 154 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 snoU13.16-201ENST00000459350 104 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 Y_RNA.676-201ENST00000516393 96 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 RNU7-43P-201ENST00000516554 64 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 AC141557.1-201ENST00000540982 400 ntBASIC2.15□□□□□ -2.07
CHMP4BP1P59074 SNORD1A-201ENST00000364968 72 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 RNU6-1307P-201ENST00000391012 103 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 HSPE1P24-201ENST00000450782 238 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 RNU6-922P-201ENST00000516753 99 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 Z97988.1-201ENST00000637697 135 ntBASIC2.14□□□□□ -2.07
CHMP4BP1P59074 RNU6-49P-201ENST00000384256 107 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 RNU6-679P-201ENST00000391003 106 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 RNY4P30-201ENST00000410216 95 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 RNU6-602P-201ENST00000411155 105 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 AL096861.1-201ENST00000610899 123 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 MIR8063-201ENST00000621930 81 ntBASIC2.13□□□□□ -2.07
CHMP4BP1P59074 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP4BP1P59074 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHMP4BP1P59074 RNU6-363P-201ENST00000362895 105 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 MIR577-201ENST00000385196 96 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 MIR1302-7-201ENST00000408841 72 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 AC108667.1-201ENST00000428618 249 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 AC009474.2-201ENST00000451383 136 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 AC108729.3-201ENST00000513484 108 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 MIR3152-201ENST00000579801 74 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 AC084768.2-201ENST00000622736 221 ntBASIC2.12□□□□□ -2.07
CHMP4BP1P59074 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
CHMP4BP1P59074 RNU6-1099P-201ENST00000363533 107 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 RNU4-67P-201ENST00000364569 141 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 RPS3AP1-201ENST00000413190 320 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 SNORD13-201ENST00000459299 104 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 RNA5SP182-201ENST00000516064 82 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 Y_RNA.694-201ENST00000516677 117 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 MIR4251-201ENST00000635819 61 ntBASIC2.11□□□□□ -2.07
CHMP4BP1P59074 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHMP4BP1P59074 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP4BP1P59074 Y_RNA.78-201ENST00000362970 110 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 RNA5SP190-201ENST00000365222 118 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 Y_RNA.360-201ENST00000365512 102 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 MIR1912-201ENST00000410389 80 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 AC079140.2-201ENST00000506193 142 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 SNORD111.1-201ENST00000516421 86 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 MIR548Z-201ENST00000584743 97 ntBASIC2.1□□□□□ -2.07
CHMP4BP1P59074 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHMP4BP1P59074 SNORD33-201ENST00000362761 85 ntBASIC2.09□□□□□ -2.07
CHMP4BP1P59074 SNORA17.3-201ENST00000391159 129 ntBASIC2.09□□□□□ -2.07
CHMP4BP1P59074 MIR934-201ENST00000401241 83 ntBASIC2.09□□□□□ -2.07
CHMP4BP1P59074 SNORA7.5-201ENST00000410672 110 ntBASIC2.09□□□□□ -2.07
CHMP4BP1P59074 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP4BP1P59074 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.07
CHMP4BP1P59074 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHMP4BP1P59074 RNU6-1131P-201ENST00000364955 107 ntBASIC2.08□□□□□ -2.08
CHMP4BP1P59074 AC091304.10-201ENST00000641554 121 ntBASIC2.08□□□□□ -2.08
CHMP4BP1P59074 WWP1P1-201ENST00000466609 2769 ntBASIC2.08□□□□□ -2.08
CHMP4BP1P59074 Y_RNA.155-201ENST00000363632 101 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 Y_RNA.299-201ENST00000364973 94 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 Y_RNA.369-201ENST00000365568 117 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 SNORA18-201ENST00000384416 132 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 RNA5SP261-201ENST00000410536 106 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC244023.1-201ENST00000426884 112 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC245047.7-201ENST00000440265 293 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 RNU6-893P-201ENST00000458841 100 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 RNU6-322P-201ENST00000516010 103 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 RNU6-521P-201ENST00000516663 105 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 RNU7-35P-201ENST00000517174 62 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC242498.1-201ENST00000604134 111 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 PRELID3BP2-201ENST00000605362 201 ntBASIC2.07□□□□□ -2.08
CHMP4BP1P59074 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP4BP1P59074 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP4BP1P59074 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
CHMP4BP1P59074 Y_RNA.4-201ENST00000362333 112 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 SNORA25.3-201ENST00000363205 127 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 Y_RNA.466-201ENST00000384294 113 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 RNY1P7-201ENST00000384743 110 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 RNU6-1067P-201ENST00000384752 107 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 RNU6-733P-201ENST00000410759 104 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 MTATP8P2-201ENST00000435212 202 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 AC027119.1-201ENST00000440877 241 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 AC012531.4-201ENST00000616509 177 ntBASIC2.06□□□□□ -2.08
CHMP4BP1P59074 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CHMP4BP1P59074 RNY3P2-201ENST00000362918 102 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms