Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR4432-201ENST00000581823 84 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 SNORD58B-201ENST00000607313 66 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 PART1_1.1-201ENST00000611761 217 ntBASIC-0.44□□□□□ -2.48
CLDN6P56747 MIR655-201ENST00000362159 97 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 RNU1-115P-201ENST00000365329 160 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 RNU6-949P-201ENST00000384040 107 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 RNY3P5-201ENST00000384127 102 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 MT-TQ-201ENST00000387372 72 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 MIR501-201ENST00000390204 84 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
CLDN6P56747 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 AP003072.1-201ENST00000531740 145 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 MIR3666-201ENST00000607845 111 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 AC092794.1-201ENST00000612734 582 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 AC084781.2-201ENST00000615568 161 ntBASIC-0.45□□□□□ -2.48
CLDN6P56747 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CLDN6P56747 AL596211.1-201ENST00000569873 2277 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 RNU6-102P-201ENST00000384485 104 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 SNORA20-201ENST00000384662 132 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 MIR526A2-201ENST00000390198 65 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 FGF7P6-202ENST00000451282 293 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 RNU6-475P-201ENST00000516073 104 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.46□□□□□ -2.48
CLDN6P56747 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.46□□□□□ -2.48
CLDN6P56747 SNORA25.7-201ENST00000364375 127 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 SNORA3B-201ENST00000391305 131 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 PMCHL1-202ENST00000423102 261 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 HSPE1P25-201ENST00000455484 251 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 RNU6-180P-201ENST00000516697 61 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 AC040926.1-201ENST00000530195 238 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 MIR4324-201ENST00000584846 72 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 AC006006.1-201ENST00000603082 144 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 AL590491.3-201ENST00000610731 82 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 MIR376A1-201ENST00000616574 68 ntBASIC-0.47□□□□□ -2.48
CLDN6P56747 RNU4-90P-201ENST00000362773 141 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 RNU4-10P-201ENST00000364383 140 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 AL500527.2-201ENST00000454105 95 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 RNU7-80P-201ENST00000459562 61 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 RNU6-507P-201ENST00000516045 100 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 IGKV1-22-201ENST00000524313 326 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 AC007485.1-201ENST00000616755 206 ntBASIC-0.48□□□□□ -2.49
CLDN6P56747 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 RNA5SP245-201ENST00000364239 121 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 RNA5SP266-201ENST00000410273 108 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 SPINT5P-201ENST00000448174 155 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 SCARNA17-201ENST00000516183 144 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 DEFB131E-201ENST00000532329 154 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 MIR548AD-201ENST00000584780 82 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 U7.6-201ENST00000610841 64 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 AC091932.4-201ENST00000623386 200 ntBASIC-0.49□□□□□ -2.49
CLDN6P56747 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 RNY1P7-201ENST00000384743 110 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
CLDN6P56747 MTATP6P23-201ENST00000440153 476 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 RNA5SP470-201ENST00000516463 106 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 RNU2-60P-201ENST00000517290 128 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 MIR3925-201ENST00000584674 77 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 SNORA70.25-201ENST00000612741 95 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 AL442067.1-201ENST00000613261 223 ntBASIC-0.5□□□□□ -2.49
CLDN6P56747 SNORA22.1-201ENST00000362701 134 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 SNORA63.5-201ENST00000363548 123 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 RNU6-726P-201ENST00000364680 107 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 SNORA18-201ENST00000384416 132 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 SNORD83B-201ENST00000386745 93 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 AC244250.2-201ENST00000418731 148 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 RNU6-277P-201ENST00000516272 106 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 NAMPTP3-201ENST00000569273 224 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 MIR5706-201ENST00000579841 80 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 MIR5688-201ENST00000580619 83 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 MIR6738-201ENST00000619620 64 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 MIR376A2-201ENST00000636782 80 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 MIR1302-1-201ENST00000637932 143 ntBASIC-0.51□□□□□ -2.49
CLDN6P56747 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.52□□□□□ -2.49
CLDN6P56747 SNORD114-25-201ENST00000363742 72 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms