Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.366-201ENST00000365540 102 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 RNU7-164P-201ENST00000459221 62 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 RNU7-113P-201ENST00000459273 62 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 AC113410.1-201ENST00000505029 247 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 MIR4769-201ENST00000584126 77 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 AC108081.1-201ENST00000604358 221 ntBASIC1.19□□□□□ -2.22
SUMO3P55854 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
SUMO3P55854 Y_RNA.171-201ENST00000363760 102 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 Y_RNA.280-201ENST00000364765 112 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 RNU6-1165P-201ENST00000410119 107 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 MIR18B-201ENST00000454574 71 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
SUMO3P55854 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SUMO3P55854 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 Y_RNA.298-201ENST00000364960 107 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 Y_RNA.531-201ENST00000384589 121 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 Y_RNA.586-201ENST00000391146 98 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 AL158147.1-201ENST00000443970 75 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.17□□□□□ -2.22
SUMO3P55854 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 RNA5SP458-201ENST00000516188 119 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 AC004812.1-201ENST00000540773 146 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 RNU6-94P-201ENST00000607728 107 ntBASIC1.17□□□□□ -2.22
SUMO3P55854 RNU6-704P-201ENST00000364162 103 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNU6-934P-201ENST00000365154 107 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 MIR539-201ENST00000365690 78 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNA5SP237-201ENST00000410414 113 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNU6-994P-201ENST00000410507 111 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 AL512326.2-201ENST00000426359 151 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNU6-237P-201ENST00000515985 71 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RN7SKP19-201ENST00000516016 252 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
SUMO3P55854 RNU6-187P-201ENST00000384139 106 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 MT-TF-201ENST00000387314 71 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 RNU7-123P-201ENST00000515911 60 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 RNA5SP33-201ENST00000516687 98 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 AL662814.1-201ENST00000617364 121 ntBASIC1.15□□□□□ -2.23
SUMO3P55854 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SUMO3P55854 MIR30D-201ENST00000362283 70 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 Y_RNA.470-201ENST00000384307 117 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 SNORA18-201ENST00000384416 132 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 RNU6-1237P-201ENST00000384777 107 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 MIR942-201ENST00000401111 86 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 RNU6-1086P-201ENST00000410930 100 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
SUMO3P55854 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 Y_RNA.140-201ENST00000363474 103 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 Y_RNA.299-201ENST00000364973 94 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 Y_RNA.617-201ENST00000410920 90 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 RPS26P5-201ENST00000418544 335 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 U7.7-201ENST00000459276 60 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 RNU6-1110P-201ENST00000516462 101 ntBASIC1.13□□□□□ -2.23
SUMO3P55854 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
SUMO3P55854 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SUMO3P55854 RNU6-342P-201ENST00000384521 104 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 AL603908.1-201ENST00000406098 201 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 MIR1827-201ENST00000408549 66 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 SNORD83.1-201ENST00000411362 77 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 SUMO1P3-201ENST00000439961 304 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 snoU13.21-201ENST00000459368 105 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 RNY4P20-201ENST00000516678 93 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 RNU7-35P-201ENST00000517174 62 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 IGKV1-22-201ENST00000524313 326 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 AC141846.1-201ENST00000568348 142 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 AL136317.1-201ENST00000612653 226 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
SUMO3P55854 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
SUMO3P55854 RNU6-1211P-201ENST00000459179 105 ntBASIC1.11□□□□□ -2.23
SUMO3P55854 SNORA4-201ENST00000584302 138 ntBASIC1.11□□□□□ -2.23
SUMO3P55854 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.1□□□□□ -2.23
SUMO3P55854 RNA5SP136-201ENST00000410906 107 ntBASIC1.1□□□□□ -2.23
SUMO3P55854 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
SUMO3P55854 snoU13.31-201ENST00000607291 104 ntBASIC1.1□□□□□ -2.23
SUMO3P55854 MIR100-201ENST00000385259 80 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 RNU4-69P-201ENST00000410677 143 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 PDCD5P2-201ENST00000507570 312 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 MIR4771-2-201ENST00000577758 74 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 MIR4771-1-201ENST00000582617 74 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 MIR548AE2-201ENST00000583456 67 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
SUMO3P55854 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
SUMO3P55854 RNU6-235P-201ENST00000362644 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms