Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.82□□□□□ -2.28
PDX1P52945 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
PDX1P52945 AC010332.2-201ENST00000613083 1904 ntBASIC0.81□□□□□ -2.28
PDX1P52945 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
PDX1P52945 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
PDX1P52945 SNORA81.3-201ENST00000517283 198 ntBASIC0.81□□□□□ -2.28
PDX1P52945 MIR6841-201ENST00000637129 72 ntBASIC0.81□□□□□ -2.28
PDX1P52945 Y_RNA.29-201ENST00000362570 113 ntBASIC0.8□□□□□ -2.28
PDX1P52945 RNY1P11-201ENST00000363759 113 ntBASIC0.8□□□□□ -2.28
PDX1P52945 RNU4-84P-201ENST00000364200 139 ntBASIC0.8□□□□□ -2.28
PDX1P52945 Y_RNA.454-201ENST00000384224 113 ntBASIC0.8□□□□□ -2.28
PDX1P52945 MIR588-201ENST00000384900 83 ntBASIC0.8□□□□□ -2.28
PDX1P52945 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
PDX1P52945 AC067940.1-201ENST00000458411 300 ntBASIC0.8□□□□□ -2.28
PDX1P52945 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
PDX1P52945 RNA5SP236-201ENST00000516169 116 ntBASIC0.8□□□□□ -2.28
PDX1P52945 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.8□□□□□ -2.28
PDX1P52945 MIR4771-2-201ENST00000577758 74 ntBASIC0.8□□□□□ -2.28
PDX1P52945 MIR4771-1-201ENST00000582617 74 ntBASIC0.8□□□□□ -2.28
PDX1P52945 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
PDX1P52945 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
PDX1P52945 Y_RNA.337-201ENST00000365312 102 ntBASIC0.79□□□□□ -2.28
PDX1P52945 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.79□□□□□ -2.28
PDX1P52945 RNU6-1165P-201ENST00000410119 107 ntBASIC0.79□□□□□ -2.28
PDX1P52945 snoU13.2-201ENST00000459201 104 ntBASIC0.79□□□□□ -2.28
PDX1P52945 RNU6-1110P-201ENST00000516462 101 ntBASIC0.79□□□□□ -2.28
PDX1P52945 RN7SL793P-201ENST00000583259 296 ntBASIC0.79□□□□□ -2.28
PDX1P52945 AC090425.1-201ENST00000610007 140 ntBASIC0.79□□□□□ -2.28
PDX1P52945 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.79□□□□□ -2.28
PDX1P52945 AC004792.1-201ENST00000614523 137 ntBASIC0.79□□□□□ -2.28
PDX1P52945 AC021613.1-201ENST00000623880 111 ntBASIC0.79□□□□□ -2.28
PDX1P52945 Y_RNA.205-201ENST00000364128 113 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
PDX1P52945 Y_RNA.785-201ENST00000384290 109 ntBASIC0.78□□□□□ -2.28
PDX1P52945 MIR563-201ENST00000385080 79 ntBASIC0.78□□□□□ -2.28
PDX1P52945 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU6-1319P-201ENST00000390855 104 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU6-747P-201ENST00000390928 104 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU6-239P-201ENST00000390990 99 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU6-241P-201ENST00000391148 104 ntBASIC0.78□□□□□ -2.28
PDX1P52945 SNORA75.5-201ENST00000391291 81 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU6-177P-201ENST00000411257 104 ntBASIC0.78□□□□□ -2.28
PDX1P52945 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
PDX1P52945 Y_RNA.700-201ENST00000516806 100 ntBASIC0.78□□□□□ -2.28
PDX1P52945 RNU7-70P-201ENST00000516941 66 ntBASIC0.78□□□□□ -2.28
PDX1P52945 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
PDX1P52945 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
PDX1P52945 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
PDX1P52945 RNU6-934P-201ENST00000365154 107 ntBASIC0.77□□□□□ -2.29
PDX1P52945 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.77□□□□□ -2.29
PDX1P52945 RNU6-588P-201ENST00000410281 105 ntBASIC0.77□□□□□ -2.29
PDX1P52945 RPS26P5-201ENST00000418544 335 ntBASIC0.77□□□□□ -2.29
PDX1P52945 RNU2-60P-201ENST00000517290 128 ntBASIC0.77□□□□□ -2.29
PDX1P52945 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
PDX1P52945 AC020891.4-201ENST00000605745 93 ntBASIC0.77□□□□□ -2.29
PDX1P52945 MIR1-1-201ENST00000362147 71 ntBASIC0.76□□□□□ -2.29
PDX1P52945 MIR30D-201ENST00000362283 70 ntBASIC0.76□□□□□ -2.29
PDX1P52945 SNORA22.1-201ENST00000362701 134 ntBASIC0.76□□□□□ -2.29
PDX1P52945 RNU6-818P-201ENST00000364837 108 ntBASIC0.76□□□□□ -2.29
PDX1P52945 Y_RNA.357-201ENST00000365487 109 ntBASIC0.76□□□□□ -2.29
PDX1P52945 Y_RNA.430-201ENST00000384081 110 ntBASIC0.76□□□□□ -2.29
PDX1P52945 Y_RNA.441-201ENST00000384123 112 ntBASIC0.76□□□□□ -2.29
PDX1P52945 Y_RNA.497-201ENST00000384447 98 ntBASIC0.76□□□□□ -2.29
PDX1P52945 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
PDX1P52945 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
PDX1P52945 SNORD99-201ENST00000408612 74 ntBASIC0.76□□□□□ -2.29
PDX1P52945 Y_RNA.662-201ENST00000516028 97 ntBASIC0.76□□□□□ -2.29
PDX1P52945 RNU7-121P-201ENST00000516604 62 ntBASIC0.76□□□□□ -2.29
PDX1P52945 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
PDX1P52945 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PDX1P52945 RNY1P6-201ENST00000384193 109 ntBASIC0.75□□□□□ -2.29
PDX1P52945 SNORA20-201ENST00000384662 132 ntBASIC0.75□□□□□ -2.29
PDX1P52945 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
PDX1P52945 RNA5SP261-201ENST00000410536 106 ntBASIC0.75□□□□□ -2.29
PDX1P52945 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
PDX1P52945 RNU6-1258P-201ENST00000516911 111 ntBASIC0.75□□□□□ -2.29
PDX1P52945 MIR6844-201ENST00000637122 62 ntBASIC0.75□□□□□ -2.29
PDX1P52945 RNU6-349P-201ENST00000362402 107 ntBASIC0.74□□□□□ -2.29
PDX1P52945 Y_RNA.272-201ENST00000364696 102 ntBASIC0.74□□□□□ -2.29
PDX1P52945 RNU6-1318P-201ENST00000365389 103 ntBASIC0.74□□□□□ -2.29
PDX1P52945 RNY1P4-201ENST00000384595 115 ntBASIC0.74□□□□□ -2.29
PDX1P52945 MIR216A-201ENST00000385063 110 ntBASIC0.74□□□□□ -2.29
PDX1P52945 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
PDX1P52945 AC113410.1-201ENST00000505029 247 ntBASIC0.74□□□□□ -2.29
PDX1P52945 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
PDX1P52945 MIR3646-201ENST00000578301 84 ntBASIC0.74□□□□□ -2.29
PDX1P52945 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
PDX1P52945 DNAJC19P2-201ENST00000593340 302 ntBASIC0.74□□□□□ -2.29
PDX1P52945 RNU6-508P-201ENST00000363231 103 ntBASIC0.73□□□□□ -2.29
PDX1P52945 RNU6-1237P-201ENST00000384777 107 ntBASIC0.73□□□□□ -2.29
PDX1P52945 MIR520F-201ENST00000384824 87 ntBASIC0.73□□□□□ -2.29
PDX1P52945 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
PDX1P52945 RNU6-1135P-201ENST00000411083 103 ntBASIC0.73□□□□□ -2.29
PDX1P52945 AC244098.3-201ENST00000424803 96 ntBASIC0.73□□□□□ -2.29
PDX1P52945 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
PDX1P52945 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
PDX1P52945 MIR4804-201ENST00000581683 73 ntBASIC0.73□□□□□ -2.29
PDX1P52945 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.73□□□□□ -2.29
PDX1P52945 AL662814.1-201ENST00000617364 121 ntBASIC0.73□□□□□ -2.29
PDX1P52945 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms