Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 Y_RNA.797-201ENST00000515977 94 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
LIG4P49917 RNU7-156P-201ENST00000517214 74 ntBASIC0.55□□□□□ -2.32
LIG4P49917 AC008608.1-201ENST00000603910 127 ntBASIC0.55□□□□□ -2.32
LIG4P49917 U6.90-201ENST00000614007 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 U6.70-201ENST00000620287 104 ntBASIC0.55□□□□□ -2.32
LIG4P49917 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
LIG4P49917 Y_RNA.121-201ENST00000363309 113 ntBASIC0.54□□□□□ -2.32
LIG4P49917 RNU6-978P-201ENST00000364371 103 ntBASIC0.54□□□□□ -2.32
LIG4P49917 RNU6-923P-201ENST00000364753 107 ntBASIC0.54□□□□□ -2.32
LIG4P49917 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
LIG4P49917 RNU7-70P-201ENST00000516941 66 ntBASIC0.54□□□□□ -2.32
LIG4P49917 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.54□□□□□ -2.32
LIG4P49917 MIR3152-201ENST00000579801 74 ntBASIC0.54□□□□□ -2.32
LIG4P49917 AL162730.1-201ENST00000605734 292 ntBASIC0.54□□□□□ -2.32
LIG4P49917 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
LIG4P49917 Y_RNA.20-201ENST00000362479 113 ntBASIC0.53□□□□□ -2.32
LIG4P49917 Y_RNA.430-201ENST00000384081 110 ntBASIC0.53□□□□□ -2.32
LIG4P49917 RNA5SP237-201ENST00000410414 113 ntBASIC0.53□□□□□ -2.32
LIG4P49917 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.53□□□□□ -2.32
LIG4P49917 MIR4308-201ENST00000580634 81 ntBASIC0.53□□□□□ -2.32
LIG4P49917 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
LIG4P49917 SNORD92-201ENST00000585078 85 ntBASIC0.53□□□□□ -2.32
LIG4P49917 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
LIG4P49917 Y_RNA.350-201ENST00000365409 98 ntBASIC0.52□□□□□ -2.33
LIG4P49917 SNORA20-201ENST00000384662 132 ntBASIC0.52□□□□□ -2.33
LIG4P49917 Y_RNA.626-201ENST00000411288 95 ntBASIC0.52□□□□□ -2.33
LIG4P49917 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
LIG4P49917 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
LIG4P49917 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
LIG4P49917 Y_RNA.162-201ENST00000363683 102 ntBASIC0.51□□□□□ -2.33
LIG4P49917 Y_RNA.182-201ENST00000363880 111 ntBASIC0.51□□□□□ -2.33
LIG4P49917 RNU6-597P-201ENST00000365620 102 ntBASIC0.51□□□□□ -2.33
LIG4P49917 Y_RNA.571-201ENST00000384753 98 ntBASIC0.51□□□□□ -2.33
LIG4P49917 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
LIG4P49917 RNA5SP127-201ENST00000411051 133 ntBASIC0.51□□□□□ -2.33
LIG4P49917 RPL39P25-201ENST00000449384 154 ntBASIC0.51□□□□□ -2.33
LIG4P49917 RNU6-1045P-201ENST00000516321 107 ntBASIC0.51□□□□□ -2.33
LIG4P49917 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
LIG4P49917 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LIG4P49917 Y_RNA.36-201ENST00000362602 112 ntBASIC0.5□□□□□ -2.33
LIG4P49917 Y_RNA.193-201ENST00000363979 102 ntBASIC0.5□□□□□ -2.33
LIG4P49917 RNU6-643P-201ENST00000384018 107 ntBASIC0.5□□□□□ -2.33
LIG4P49917 RNU6-574P-201ENST00000384265 107 ntBASIC0.5□□□□□ -2.33
LIG4P49917 Y_RNA.478-201ENST00000384358 107 ntBASIC0.5□□□□□ -2.33
LIG4P49917 RNU6-342P-201ENST00000384521 104 ntBASIC0.5□□□□□ -2.33
LIG4P49917 SNORD93-201ENST00000408813 74 ntBASIC0.5□□□□□ -2.33
LIG4P49917 AL118496.2-201ENST00000448300 230 ntBASIC0.5□□□□□ -2.33
LIG4P49917 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
LIG4P49917 SCARNA15-202ENST00000516881 127 ntBASIC0.5□□□□□ -2.33
LIG4P49917 MIR3128-201ENST00000581957 66 ntBASIC0.5□□□□□ -2.33
LIG4P49917 MIR4503-201ENST00000582187 83 ntBASIC0.5□□□□□ -2.33
LIG4P49917 AL662814.1-201ENST00000617364 121 ntBASIC0.5□□□□□ -2.33
LIG4P49917 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
LIG4P49917 AC021613.1-201ENST00000623880 111 ntBASIC0.5□□□□□ -2.33
LIG4P49917 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
LIG4P49917 Y_RNA.60-201ENST00000362831 98 ntBASIC0.49□□□□□ -2.33
LIG4P49917 RNU4-70P-201ENST00000384579 139 ntBASIC0.49□□□□□ -2.33
LIG4P49917 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
LIG4P49917 MIR624-201ENST00000385217 97 ntBASIC0.49□□□□□ -2.33
LIG4P49917 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
LIG4P49917 RNU6-1149P-201ENST00000516810 97 ntBASIC0.49□□□□□ -2.33
LIG4P49917 MIR4719-201ENST00000585233 84 ntBASIC0.49□□□□□ -2.33
LIG4P49917 AC062037.2-201ENST00000610137 73 ntBASIC0.49□□□□□ -2.33
LIG4P49917 MIR6841-201ENST00000637129 72 ntBASIC0.49□□□□□ -2.33
LIG4P49917 SNORA22.1-201ENST00000362701 134 ntBASIC0.48□□□□□ -2.33
LIG4P49917 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
LIG4P49917 Y_RNA.466-201ENST00000384294 113 ntBASIC0.48□□□□□ -2.33
LIG4P49917 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
LIG4P49917 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.48□□□□□ -2.33
LIG4P49917 MTND3P2-201ENST00000438452 342 ntBASIC0.48□□□□□ -2.33
LIG4P49917 RNU4-71P-201ENST00000516258 113 ntBASIC0.48□□□□□ -2.33
LIG4P49917 RNU6-275P-201ENST00000364910 107 ntBASIC0.47□□□□□ -2.33
LIG4P49917 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
LIG4P49917 RNU6-918P-201ENST00000391219 106 ntBASIC0.47□□□□□ -2.33
LIG4P49917 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
LIG4P49917 RNU6-448P-201ENST00000517052 107 ntBASIC0.47□□□□□ -2.33
LIG4P49917 RNU6-111P-201ENST00000517179 105 ntBASIC0.47□□□□□ -2.33
LIG4P49917 MRPS18CP4-201ENST00000535821 231 ntBASIC0.47□□□□□ -2.33
LIG4P49917 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
LIG4P49917 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.47□□□□□ -2.33
LIG4P49917 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.47□□□□□ -2.33
LIG4P49917 U4.1-201ENST00000620349 87 ntBASIC0.47□□□□□ -2.33
LIG4P49917 SNORA25.7-201ENST00000364375 127 ntBASIC0.46□□□□□ -2.34
LIG4P49917 Y_RNA.307-201ENST00000365022 117 ntBASIC0.46□□□□□ -2.34
LIG4P49917 RNU6-1336P-201ENST00000383886 109 ntBASIC0.46□□□□□ -2.34
LIG4P49917 Y_RNA.447-201ENST00000384184 113 ntBASIC0.46□□□□□ -2.34
LIG4P49917 RNU4-83P-201ENST00000410863 133 ntBASIC0.46□□□□□ -2.34
LIG4P49917 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
LIG4P49917 AC141846.1-201ENST00000568348 142 ntBASIC0.46□□□□□ -2.34
LIG4P49917 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
LIG4P49917 RNU4-16P-201ENST00000364737 141 ntBASIC0.45□□□□□ -2.34
LIG4P49917 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
LIG4P49917 Y_RNA.412-201ENST00000384001 104 ntBASIC0.45□□□□□ -2.34
LIG4P49917 RNY1P4-201ENST00000384595 115 ntBASIC0.45□□□□□ -2.34
LIG4P49917 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
LIG4P49917 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.45□□□□□ -2.34
LIG4P49917 RNU6-1023P-201ENST00000516137 106 ntBASIC0.45□□□□□ -2.34
LIG4P49917 MIR8066-201ENST00000617280 78 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms