Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
THBS3P49746 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.45□□□□□ -2.18
THBS3P49746 Y_RNA.93-201ENST00000363066 109 ntBASIC1.45□□□□□ -2.18
THBS3P49746 Y_RNA.107-201ENST00000363190 121 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNU4-36P-201ENST00000364294 144 ntBASIC1.45□□□□□ -2.18
THBS3P49746 Y_RNA.430-201ENST00000384081 110 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNU6-409P-201ENST00000384114 104 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNU6-360P-201ENST00000390944 104 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNU6-679P-201ENST00000391003 106 ntBASIC1.45□□□□□ -2.18
THBS3P49746 SNORA7.5-201ENST00000410672 110 ntBASIC1.45□□□□□ -2.18
THBS3P49746 SCARNA23-201ENST00000516060 130 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
THBS3P49746 RNU6-762P-201ENST00000517107 102 ntBASIC1.45□□□□□ -2.18
THBS3P49746 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.45□□□□□ -2.18
THBS3P49746 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
THBS3P49746 RNU6-1123P-201ENST00000362347 106 ntBASIC1.44□□□□□ -2.18
THBS3P49746 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
THBS3P49746 Y_RNA.342-201ENST00000365352 113 ntBASIC1.44□□□□□ -2.18
THBS3P49746 Y_RNA.466-201ENST00000384294 113 ntBASIC1.44□□□□□ -2.18
THBS3P49746 MIR194-1-201ENST00000384892 85 ntBASIC1.44□□□□□ -2.18
THBS3P49746 MIR1302-4-201ENST00000408701 150 ntBASIC1.44□□□□□ -2.18
THBS3P49746 RNA5SP261-201ENST00000410536 106 ntBASIC1.44□□□□□ -2.18
THBS3P49746 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.44□□□□□ -2.18
THBS3P49746 AC003989.2-201ENST00000440224 169 ntBASIC1.44□□□□□ -2.18
THBS3P49746 snoU13.16-201ENST00000459350 104 ntBASIC1.44□□□□□ -2.18
THBS3P49746 MIR4694-201ENST00000578534 80 ntBASIC1.44□□□□□ -2.18
THBS3P49746 MIR4764-201ENST00000580680 88 ntBASIC1.44□□□□□ -2.18
THBS3P49746 MALAT1.1-201ENST00000618249 95 ntBASIC1.44□□□□□ -2.18
THBS3P49746 AC008133.2-201ENST00000624540 351 ntBASIC1.44□□□□□ -2.18
THBS3P49746 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU6-832P-201ENST00000363319 107 ntBASIC1.43□□□□□ -2.18
THBS3P49746 Y_RNA.220-201ENST00000364244 109 ntBASIC1.43□□□□□ -2.18
THBS3P49746 SNORA1.1-201ENST00000364671 133 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU6-342P-201ENST00000384521 104 ntBASIC1.43□□□□□ -2.18
THBS3P49746 Y_RNA.558-201ENST00000384685 113 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU6-1067P-201ENST00000384752 107 ntBASIC1.43□□□□□ -2.18
THBS3P49746 SNORD77B-201ENST00000391112 67 ntBASIC1.43□□□□□ -2.18
THBS3P49746 Y_RNA.601-201ENST00000410500 113 ntBASIC1.43□□□□□ -2.18
THBS3P49746 AL603825.1-201ENST00000438481 80 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU6-795P-201ENST00000516323 103 ntBASIC1.43□□□□□ -2.18
THBS3P49746 RNU7-43P-201ENST00000516554 64 ntBASIC1.43□□□□□ -2.18
THBS3P49746 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.43□□□□□ -2.18
THBS3P49746 MIR548Z-201ENST00000584743 97 ntBASIC1.43□□□□□ -2.18
THBS3P49746 FAM71BP1-201ENST00000604431 523 ntBASIC1.43□□□□□ -2.18
THBS3P49746 MIR8055-201ENST00000610739 97 ntBASIC1.43□□□□□ -2.18
THBS3P49746 AL442128.1-201ENST00000615151 90 ntBASIC1.43□□□□□ -2.18
THBS3P49746 AC012531.4-201ENST00000616509 177 ntBASIC1.43□□□□□ -2.18
THBS3P49746 MIR2052-201ENST00000636055 55 ntBASIC1.43□□□□□ -2.18
THBS3P49746 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
THBS3P49746 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
THBS3P49746 Y_RNA.388-201ENST00000383919 113 ntBASIC1.42□□□□□ -2.18
THBS3P49746 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
THBS3P49746 AC004965.1-201ENST00000413033 213 ntBASIC1.42□□□□□ -2.18
THBS3P49746 RNU7-61P-201ENST00000515897 61 ntBASIC1.42□□□□□ -2.18
THBS3P49746 RNU6-521P-201ENST00000516663 105 ntBASIC1.42□□□□□ -2.18
THBS3P49746 RNU6-844P-201ENST00000517175 102 ntBASIC1.42□□□□□ -2.18
THBS3P49746 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.42□□□□□ -2.18
THBS3P49746 MIR8065-201ENST00000620577 100 ntBASIC1.42□□□□□ -2.18
THBS3P49746 AC091304.10-201ENST00000641554 121 ntBASIC1.42□□□□□ -2.18
THBS3P49746 RNU6-170P-201ENST00000362832 104 ntBASIC1.41□□□□□ -2.18
THBS3P49746 Y_RNA.140-201ENST00000363474 103 ntBASIC1.41□□□□□ -2.18
THBS3P49746 RNU6-1201P-201ENST00000384227 107 ntBASIC1.41□□□□□ -2.18
THBS3P49746 MIR9-3-201ENST00000385084 90 ntBASIC1.41□□□□□ -2.18
THBS3P49746 RNY4P29-201ENST00000410801 97 ntBASIC1.41□□□□□ -2.18
THBS3P49746 RNU6-602P-201ENST00000411155 105 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AC245047.7-201ENST00000440265 293 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.41□□□□□ -2.18
THBS3P49746 RNU7-41P-201ENST00000515917 61 ntBASIC1.41□□□□□ -2.18
THBS3P49746 SNORA25.15-201ENST00000516487 89 ntBASIC1.41□□□□□ -2.18
THBS3P49746 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AL773524.1-201ENST00000614065 229 ntBASIC1.41□□□□□ -2.18
THBS3P49746 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
THBS3P49746 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
THBS3P49746 Z97988.1-201ENST00000637697 135 ntBASIC1.41□□□□□ -2.18
THBS3P49746 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
THBS3P49746 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
THBS3P49746 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.4□□□□□ -2.18
THBS3P49746 SNORD48-201ENST00000364953 64 ntBASIC1.4□□□□□ -2.19
THBS3P49746 RNU6-644P-201ENST00000391155 98 ntBASIC1.4□□□□□ -2.19
THBS3P49746 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
THBS3P49746 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
THBS3P49746 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.4□□□□□ -2.19
THBS3P49746 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
THBS3P49746 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
THBS3P49746 Y_RNA.10-201ENST00000362371 110 ntBASIC1.39□□□□□ -2.19
THBS3P49746 Y_RNA.290-201ENST00000364879 114 ntBASIC1.39□□□□□ -2.19
THBS3P49746 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
THBS3P49746 SNORA18-201ENST00000384416 132 ntBASIC1.39□□□□□ -2.19
THBS3P49746 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
THBS3P49746 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
THBS3P49746 SNORA26.2-201ENST00000390922 122 ntBASIC1.39□□□□□ -2.19
THBS3P49746 RNU6-1307P-201ENST00000391012 103 ntBASIC1.39□□□□□ -2.19
THBS3P49746 AC244636.1-201ENST00000421152 228 ntBASIC1.39□□□□□ -2.19
THBS3P49746 AC004941.2-201ENST00000427009 228 ntBASIC1.39□□□□□ -2.19
THBS3P49746 Y_RNA.676-201ENST00000516393 96 ntBASIC1.39□□□□□ -2.19
THBS3P49746 RNU6-1018P-201ENST00000516577 106 ntBASIC1.39□□□□□ -2.19
THBS3P49746 RNU7-35P-201ENST00000517174 62 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms