Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNA5SP237-201ENST00000410414 113 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 RNU4-83P-201ENST00000410863 133 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 SNORD2.1-201ENST00000458762 69 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 uc_338.16-201ENST00000621804 95 ntBASIC0.15□□□□□ -2.39
CXCL12P48061 AL596211.1-201ENST00000569873 2277 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 Y_RNA.42-201ENST00000362660 108 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 RNU6-653P-201ENST00000363074 106 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 SNORA36.1-201ENST00000363424 132 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 Y_RNA.512-201ENST00000384518 102 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AL442663.2-201ENST00000554385 511 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 MIR5197-201ENST00000583721 112 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AL356055.1-201ENST00000602528 446 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AL662814.1-201ENST00000617364 121 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AL365265.1-201ENST00000621045 234 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 AC091932.4-201ENST00000623386 200 ntBASIC0.14□□□□□ -2.39
CXCL12P48061 Y_RNA.13-201ENST00000362403 112 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.82-201ENST00000363000 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.92-201ENST00000363043 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.235-201ENST00000364412 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.306-201ENST00000365015 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.312-201ENST00000365089 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.322-201ENST00000365151 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 SNORA33.2-201ENST00000365413 134 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 U8.15-201ENST00000390947 134 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 RNU6-1109P-201ENST00000391187 107 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 RNA5SP261-201ENST00000410536 106 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.13□□□□□ -2.39
CXCL12P48061 RPL39P25-201ENST00000449384 154 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.650-201ENST00000459002 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.777-201ENST00000516982 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.771-201ENST00000598668 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 U2.14-201ENST00000615943 113 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 Y_RNA.789-201ENST00000622480 102 ntBASIC0.13□□□□□ -2.39
CXCL12P48061 RNU6-403P-201ENST00000363163 104 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 Y_RNA.416-201ENST00000384014 113 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 Y_RNA.542-201ENST00000384641 111 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 RNU6-381P-201ENST00000391259 108 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 Y_RNA.590-201ENST00000410140 107 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 Y_RNA.618-201ENST00000410949 107 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 SEPT7P4-201ENST00000437076 306 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 RNU7-80P-201ENST00000459562 61 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 MIR4305-201ENST00000583252 102 ntBASIC0.12□□□□□ -2.39
CXCL12P48061 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.12□□□□□ -2.39
CXCL12P48061 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
CXCL12P48061 RNU6-639P-201ENST00000384074 107 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 Y_RNA.430-201ENST00000384081 110 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CXCL12P48061 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 MTCYBP6-201ENST00000441810 138 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 Y_RNA.679-201ENST00000516416 91 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 AC141846.1-201ENST00000568348 142 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 MIR4282-201ENST00000583613 67 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.11□□□□□ -2.39
CXCL12P48061 Y_RNA.32-201ENST00000362589 110 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 Y_RNA.176-201ENST00000363815 109 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 RNU6-1292P-201ENST00000383856 107 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 Y_RNA.454-201ENST00000384224 113 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 RNU6-713P-201ENST00000384761 107 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 AC096949.1-201ENST00000412047 152 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 AL512326.2-201ENST00000426359 151 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 RNU6-469P-201ENST00000516253 101 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 Y_RNA.701-201ENST00000516812 110 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 MIR3152-201ENST00000579801 74 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 MIR4491-201ENST00000581087 68 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 AL442067.1-201ENST00000613261 223 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
CXCL12P48061 RNU6-728P-201ENST00000365375 104 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 Y_RNA.483-201ENST00000384380 101 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 SNORA20-201ENST00000384662 132 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 MT-TW-201ENST00000387382 68 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 SNORA79-201ENST00000408376 140 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 MTATP8P1-201ENST00000467115 207 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 RNU6-863P-201ENST00000515989 104 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 RNA5SP268-201ENST00000516828 124 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 AL365205.2-201ENST00000594586 68 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 AC021613.1-201ENST00000623880 111 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 MIR6841-201ENST00000637129 72 ntBASIC0.09□□□□□ -2.4
CXCL12P48061 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CXCL12P48061 MIR335-201ENST00000362173 94 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 SNORA22.1-201ENST00000362701 134 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU6-238P-201ENST00000363313 106 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU4-17P-201ENST00000365598 141 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 SNORA72.6-201ENST00000384520 129 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 MIR1912-201ENST00000410389 80 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU6-635P-201ENST00000516651 102 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 RNU6-1153P-201ENST00000516760 105 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.08□□□□□ -2.4
CXCL12P48061 MIR4643-201ENST00000577473 78 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms