Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 RNU7-62P-201ENST00000458856 62 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 RNU6-1149P-201ENST00000516810 97 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 MIR4431-201ENST00000579990 94 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
BRCC3P46736 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 Y_RNA.401-201ENST00000383965 117 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 MIR624-201ENST00000385217 97 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 MT-TG-201ENST00000387429 68 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 Y_RNA.644-201ENST00000459006 113 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 Y_RNA.674-201ENST00000516362 113 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 MIR4771-2-201ENST00000577758 74 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 MIR4771-1-201ENST00000582617 74 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 Z83818.1-201ENST00000603584 150 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
BRCC3P46736 MIR302B-201ENST00000362188 73 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 MIR30D-201ENST00000362283 70 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 Y_RNA.466-201ENST00000384294 113 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 MIR563-201ENST00000385080 79 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 MIR936-201ENST00000401264 98 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 RNA5SP127-201ENST00000411051 133 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 RNU5E-9P-201ENST00000411164 104 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 RNU6-138P-201ENST00000515952 107 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 RNU6-1258P-201ENST00000516911 111 ntBASIC0.64□□□□□ -2.31
BRCC3P46736 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
BRCC3P46736 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU6-1319P-201ENST00000390855 104 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU6-747P-201ENST00000390928 104 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU6-241P-201ENST00000391148 104 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU6-177P-201ENST00000411257 104 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 RNU7-80P-201ENST00000459562 61 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.63□□□□□ -2.31
BRCC3P46736 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.63□□□□□ -2.31
BRCC3P46736 MIR4676-201ENST00000583078 72 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
BRCC3P46736 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
BRCC3P46736 Y_RNA.52-201ENST00000362760 96 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 RNU4-16P-201ENST00000364737 141 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 SNORD105-201ENST00000386910 85 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 MIR4804-201ENST00000581683 73 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 AC021613.1-201ENST00000623880 111 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 MIR3658-201ENST00000636291 56 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 MIR6841-201ENST00000637129 72 ntBASIC0.62□□□□□ -2.31
BRCC3P46736 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-508P-201ENST00000363231 103 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-682P-201ENST00000363843 106 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 SNORA25.7-201ENST00000364375 127 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-312P-201ENST00000364629 107 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-200P-201ENST00000364743 107 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-818P-201ENST00000364837 108 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
BRCC3P46736 Y_RNA.476-201ENST00000384347 108 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 AC074198.2-201ENST00000508153 258 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNA5SP236-201ENST00000516169 116 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 RNU6-861P-201ENST00000516745 106 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
BRCC3P46736 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
BRCC3P46736 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 Y_RNA.430-201ENST00000384081 110 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 RNU6-588P-201ENST00000410281 105 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 RNU2-60P-201ENST00000517290 128 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 AP002392.1-201ENST00000537692 208 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.6□□□□□ -2.31
BRCC3P46736 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
BRCC3P46736 RNU6-349P-201ENST00000362402 107 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 Y_RNA.171-201ENST00000363760 102 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 Y_RNA.454-201ENST00000384224 113 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 Y_RNA.552-201ENST00000384665 112 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 MIR520F-201ENST00000384824 87 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 Y_RNA.793-201ENST00000411222 111 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 RNU7-185P-201ENST00000459215 60 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 RNU6-977P-201ENST00000516411 103 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 RNU7-121P-201ENST00000516604 62 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 AC072026.1-201ENST00000605023 201 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.59□□□□□ -2.31
BRCC3P46736 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
BRCC3P46736 Y_RNA.36-201ENST00000362602 112 ntBASIC0.58□□□□□ -2.32
BRCC3P46736 SNORA22.1-201ENST00000362701 134 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms