Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORD115-48-201ENST00000364764 76 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.49□□□□□ -2.65
HTTP42858 SNORA53-201ENST00000391141 249 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.49□□□□□ -2.65
HTTP42858 ELOCP20-201ENST00000422460 345 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Z83846.1-201ENST00000446798 265 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU7-48P-201ENST00000458875 63 ntBASIC-1.49□□□□□ -2.65
HTTP42858 MTCO2P30-201ENST00000503662 364 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6-88P-201ENST00000606801 100 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6-961P-201ENST00000363893 105 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.49□□□□□ -2.65
HTTP42858 RNU6-318P-201ENST00000384283 103 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.49□□□□□ -2.65
HTTP42858 PMCHL1-202ENST00000423102 261 ntBASIC-1.49□□□□□ -2.65
HTTP42858 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.49□□□□□ -2.65
HTTP42858 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.49□□□□□ -2.65
HTTP42858 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.49□□□□□ -2.65
HTTP42858 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.5□□□□□ -2.65
HTTP42858 CYCSP46-201ENST00000423569 204 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU7-113P-201ENST00000459273 62 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU6-762P-201ENST00000517107 102 ntBASIC-1.5□□□□□ -2.65
HTTP42858 AC144568.1-201ENST00000520139 137 ntBASIC-1.5□□□□□ -2.65
HTTP42858 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.5□□□□□ -2.65
HTTP42858 AC084781.2-201ENST00000615568 161 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU6-728P-201ENST00000365375 104 ntBASIC-1.5□□□□□ -2.65
HTTP42858 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.5□□□□□ -2.65
HTTP42858 MRPL42P2-201ENST00000403169 426 ntBASIC-1.5□□□□□ -2.65
HTTP42858 AL590623.1-201ENST00000427864 105 ntBASIC-1.5□□□□□ -2.65
HTTP42858 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.5□□□□□ -2.65
HTTP42858 MTATP6P24-201ENST00000576835 677 ntBASIC-1.5□□□□□ -2.65
HTTP42858 MTND4LP7-201ENST00000431728 294 ntBASIC-1.51□□□□□ -2.65
HTTP42858 RNU7-24P-201ENST00000458867 62 ntBASIC-1.51□□□□□ -2.65
HTTP42858 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.51□□□□□ -2.65
HTTP42858 AC103591.3-201ENST00000608684 209 ntBASIC-1.51□□□□□ -2.65
HTTP42858 AC245297.2-201ENST00000610119 565 ntBASIC-1.51□□□□□ -2.65
HTTP42858 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.51□□□□□ -2.65
HTTP42858 RNU6-454P-201ENST00000364292 107 ntBASIC-1.51□□□□□ -2.65
HTTP42858 RNU6-159P-201ENST00000391080 106 ntBASIC-1.51□□□□□ -2.65
HTTP42858 AL009048.1-201ENST00000450437 298 ntBASIC-1.51□□□□□ -2.65
HTTP42858 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.51□□□□□ -2.65
HTTP42858 MIR2113-201ENST00000459007 91 ntBASIC-1.51□□□□□ -2.65
HTTP42858 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.51□□□□□ -2.65
HTTP42858 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.51□□□□□ -2.65
HTTP42858 RNU6-606P-201ENST00000384721 111 ntBASIC-1.51□□□□□ -2.65
HTTP42858 AL353193.1-201ENST00000421444 268 ntBASIC-1.51□□□□□ -2.65
HTTP42858 RNU6-365P-201ENST00000517113 106 ntBASIC-1.51□□□□□ -2.65
HTTP42858 PISRT1.1-201ENST00000616930 107 ntBASIC-1.51□□□□□ -2.65
HTTP42858 SNORD36A-201ENST00000362874 73 ntBASIC-1.52□□□□□ -2.65
HTTP42858 RNU6-774P-201ENST00000363238 107 ntBASIC-1.52□□□□□ -2.65
HTTP42858 SNORD56.2-201ENST00000363242 71 ntBASIC-1.52□□□□□ -2.65
HTTP42858 RNU6-647P-201ENST00000364243 107 ntBASIC-1.52□□□□□ -2.65
HTTP42858 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.52□□□□□ -2.65
HTTP42858 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.52□□□□□ -2.65
HTTP42858 AC091932.4-201ENST00000623386 200 ntBASIC-1.52□□□□□ -2.65
HTTP42858 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.52□□□□□ -2.65
HTTP42858 AL035461.1-201ENST00000421490 332 ntBASIC-1.52□□□□□ -2.65
HTTP42858 EIF1P2-201ENST00000428233 350 ntBASIC-1.52□□□□□ -2.65
HTTP42858 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.52□□□□□ -2.65
HTTP42858 MIR4307-201ENST00000582802 84 ntBASIC-1.52□□□□□ -2.65
HTTP42858 MIR5188-201ENST00000583467 113 ntBASIC-1.52□□□□□ -2.65
HTTP42858 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.52□□□□□ -2.65
HTTP42858 RNU6-664P-201ENST00000362381 107 ntBASIC-1.53□□□□□ -2.65
HTTP42858 RNU6-462P-201ENST00000362659 105 ntBASIC-1.53□□□□□ -2.65
HTTP42858 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.53□□□□□ -2.65
HTTP42858 SNORD115-32-201ENST00000364079 82 ntBASIC-1.53□□□□□ -2.65
HTTP42858 RNU7-141P-201ENST00000459304 62 ntBASIC-1.53□□□□□ -2.65
HTTP42858 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.53□□□□□ -2.65
HTTP42858 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.53□□□□□ -2.65
HTTP42858 AC006504.6-201ENST00000590142 199 ntBASIC-1.53□□□□□ -2.65
HTTP42858 AC005014.3-201ENST00000605985 190 ntBASIC-1.53□□□□□ -2.65
HTTP42858 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.53□□□□□ -2.65
HTTP42858 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.53□□□□□ -2.65
HTTP42858 AC022878.1-201ENST00000530684 149 ntBASIC-1.53□□□□□ -2.65
HTTP42858 MTND4LP25-201ENST00000570218 163 ntBASIC-1.53□□□□□ -2.65
HTTP42858 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.53□□□□□ -2.65
HTTP42858 AC011476.5-201ENST00000615594 130 ntBASIC-1.53□□□□□ -2.65
HTTP42858 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.53□□□□□ -2.66
HTTP42858 MIR3941-201ENST00000582572 103 ntBASIC-1.53□□□□□ -2.66
HTTP42858 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.54□□□□□ -2.66
HTTP42858 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.54□□□□□ -2.66
HTTP42858 SNORD101-201ENST00000384027 73 ntBASIC-1.54□□□□□ -2.66
HTTP42858 AL512360.1-201ENST00000555346 234 ntBASIC-1.54□□□□□ -2.66
HTTP42858 MIR5693-201ENST00000577722 73 ntBASIC-1.54□□□□□ -2.66
HTTP42858 AC018638.8-201ENST00000588755 281 ntBASIC-1.54□□□□□ -2.66
HTTP42858 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.54□□□□□ -2.66
HTTP42858 AC004467.1-201ENST00000615678 330 ntBASIC-1.54□□□□□ -2.66
HTTP42858 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.54□□□□□ -2.66
HTTP42858 SNORD12B-201ENST00000410433 91 ntBASIC-1.54□□□□□ -2.66
HTTP42858 CHEK2P4-201ENST00000450340 246 ntBASIC-1.54□□□□□ -2.66
HTTP42858 SNORD11-201ENST00000459124 84 ntBASIC-1.54□□□□□ -2.66
HTTP42858 AL118558.2-201ENST00000556294 238 ntBASIC-1.54□□□□□ -2.66
HTTP42858 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.55□□□□□ -2.66
HTTP42858 SNORD115-22-201ENST00000364456 82 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-723P-201ENST00000383973 107 ntBASIC-1.55□□□□□ -2.66
HTTP42858 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.55□□□□□ -2.66
HTTP42858 RNU6-524P-201ENST00000384270 107 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms