Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 RNU1-133P-201ENST00000364867 167 ntBASIC0.61□□□□□ -2.31
FEN1P39748 RNU6-1336P-201ENST00000383886 109 ntBASIC0.61□□□□□ -2.31
FEN1P39748 Y_RNA.430-201ENST00000384081 110 ntBASIC0.61□□□□□ -2.31
FEN1P39748 Y_RNA.521-201ENST00000384560 114 ntBASIC0.61□□□□□ -2.31
FEN1P39748 MIR520H-201ENST00000385126 88 ntBASIC0.61□□□□□ -2.31
FEN1P39748 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
FEN1P39748 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.61□□□□□ -2.31
FEN1P39748 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
FEN1P39748 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
FEN1P39748 MIR30D-201ENST00000362283 70 ntBASIC0.6□□□□□ -2.31
FEN1P39748 Y_RNA.355-201ENST00000365462 98 ntBASIC0.6□□□□□ -2.31
FEN1P39748 RNU6-597P-201ENST00000365620 102 ntBASIC0.6□□□□□ -2.31
FEN1P39748 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
FEN1P39748 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
FEN1P39748 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
FEN1P39748 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
FEN1P39748 Y_RNA.188-201ENST00000363952 111 ntBASIC0.59□□□□□ -2.31
FEN1P39748 RNU6-312P-201ENST00000364629 107 ntBASIC0.59□□□□□ -2.31
FEN1P39748 Y_RNA.274-201ENST00000364714 101 ntBASIC0.59□□□□□ -2.31
FEN1P39748 Y_RNA.508-201ENST00000384502 114 ntBASIC0.59□□□□□ -2.31
FEN1P39748 RNA5SP222-201ENST00000411039 105 ntBASIC0.59□□□□□ -2.31
FEN1P39748 RNU7-185P-201ENST00000459215 60 ntBASIC0.59□□□□□ -2.31
FEN1P39748 RNU6-1219P-201ENST00000516143 112 ntBASIC0.59□□□□□ -2.31
FEN1P39748 RNU6-1271P-201ENST00000517049 105 ntBASIC0.59□□□□□ -2.31
FEN1P39748 AC022559.1-201ENST00000520905 205 ntBASIC0.59□□□□□ -2.31
FEN1P39748 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.59□□□□□ -2.31
FEN1P39748 AC021613.1-201ENST00000623880 111 ntBASIC0.59□□□□□ -2.31
FEN1P39748 MTND5P32-201ENST00000560711 1802 ntBASIC0.59□□□□□ -2.32
FEN1P39748 RNU6-379P-201ENST00000363813 104 ntBASIC0.58□□□□□ -2.32
FEN1P39748 Y_RNA.233-201ENST00000364407 101 ntBASIC0.58□□□□□ -2.32
FEN1P39748 Y_RNA.401-201ENST00000383965 117 ntBASIC0.58□□□□□ -2.32
FEN1P39748 SNORA20-201ENST00000384662 132 ntBASIC0.58□□□□□ -2.32
FEN1P39748 RNU6-1237P-201ENST00000384777 107 ntBASIC0.58□□□□□ -2.32
FEN1P39748 MIR125B2-201ENST00000385128 89 ntBASIC0.58□□□□□ -2.32
FEN1P39748 MT-TF-201ENST00000387314 71 ntBASIC0.58□□□□□ -2.32
FEN1P39748 MIR938-201ENST00000401216 83 ntBASIC0.58□□□□□ -2.32
FEN1P39748 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.58□□□□□ -2.32
FEN1P39748 AC141273.2-201ENST00000618989 130 ntBASIC0.58□□□□□ -2.32
FEN1P39748 MIR6841-201ENST00000637129 72 ntBASIC0.58□□□□□ -2.32
FEN1P39748 Y_RNA.118-201ENST00000363300 101 ntBASIC0.57□□□□□ -2.32
FEN1P39748 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
FEN1P39748 Y_RNA.393-201ENST00000383936 102 ntBASIC0.57□□□□□ -2.32
FEN1P39748 RNU6-768P-201ENST00000384683 107 ntBASIC0.57□□□□□ -2.32
FEN1P39748 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
FEN1P39748 MIR1257-201ENST00000408490 117 ntBASIC0.57□□□□□ -2.32
FEN1P39748 snoU13.18-201ENST00000459483 104 ntBASIC0.57□□□□□ -2.32
FEN1P39748 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
FEN1P39748 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
FEN1P39748 SNORA22.1-201ENST00000362701 134 ntBASIC0.56□□□□□ -2.32
FEN1P39748 Y_RNA.297-201ENST00000364950 91 ntBASIC0.56□□□□□ -2.32
FEN1P39748 Y_RNA.644-201ENST00000459006 113 ntBASIC0.56□□□□□ -2.32
FEN1P39748 Y_RNA.674-201ENST00000516362 113 ntBASIC0.56□□□□□ -2.32
FEN1P39748 AL662814.1-201ENST00000617364 121 ntBASIC0.56□□□□□ -2.32
FEN1P39748 AC078938.1-201ENST00000620993 318 ntBASIC0.56□□□□□ -2.32
FEN1P39748 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
FEN1P39748 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-1082P-201ENST00000364574 107 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU4-16P-201ENST00000364737 141 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-364P-201ENST00000384387 107 ntBASIC0.55□□□□□ -2.32
FEN1P39748 Y_RNA.515-201ENST00000384535 112 ntBASIC0.55□□□□□ -2.32
FEN1P39748 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
FEN1P39748 MT-TG-201ENST00000387429 68 ntBASIC0.55□□□□□ -2.32
FEN1P39748 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-447P-201ENST00000410293 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-1118P-201ENST00000410382 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-1076P-201ENST00000410397 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNA5SP237-201ENST00000410414 113 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-355P-201ENST00000410427 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-791P-201ENST00000410467 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-705P-201ENST00000410601 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-1100P-201ENST00000410691 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-860P-201ENST00000410860 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-1217P-201ENST00000411276 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-785P-201ENST00000411324 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 AC107027.2-201ENST00000512197 115 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-388P-201ENST00000517012 105 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU6-389P-201ENST00000517048 105 ntBASIC0.55□□□□□ -2.32
FEN1P39748 RNU7-156P-201ENST00000517214 74 ntBASIC0.55□□□□□ -2.32
FEN1P39748 AC008608.1-201ENST00000603910 127 ntBASIC0.55□□□□□ -2.32
FEN1P39748 U6.90-201ENST00000614007 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
FEN1P39748 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
FEN1P39748 U6.70-201ENST00000620287 104 ntBASIC0.55□□□□□ -2.32
FEN1P39748 Y_RNA.52-201ENST00000362760 96 ntBASIC0.54□□□□□ -2.32
FEN1P39748 Y_RNA.337-201ENST00000365312 102 ntBASIC0.54□□□□□ -2.32
FEN1P39748 SNORA36.2-201ENST00000384004 127 ntBASIC0.54□□□□□ -2.32
FEN1P39748 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
FEN1P39748 RNU7-102P-201ENST00000458948 62 ntBASIC0.54□□□□□ -2.32
FEN1P39748 MIR3612-201ENST00000579753 87 ntBASIC0.54□□□□□ -2.32
FEN1P39748 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.32
FEN1P39748 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
FEN1P39748 RNY1P6-201ENST00000384193 109 ntBASIC0.53□□□□□ -2.32
FEN1P39748 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.53□□□□□ -2.32
FEN1P39748 SNORD93-201ENST00000408813 74 ntBASIC0.53□□□□□ -2.32
FEN1P39748 RNU6-1258P-201ENST00000516911 111 ntBASIC0.53□□□□□ -2.32
FEN1P39748 Y_RNA.757-201ENST00000578934 114 ntBASIC0.53□□□□□ -2.32
FEN1P39748 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
FEN1P39748 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.53□□□□□ -2.32
FEN1P39748 AC072026.1-201ENST00000605023 201 ntBASIC0.53□□□□□ -2.32
FEN1P39748 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms