Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
TIMP3P35625 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.15□□□□□ -2.23
TIMP3P35625 MIR8055-201ENST00000610739 97 ntBASIC1.15□□□□□ -2.23
TIMP3P35625 U6.95-201ENST00000636931 70 ntBASIC1.15□□□□□ -2.23
TIMP3P35625 MIR3914-2-201ENST00000637339 95 ntBASIC1.15□□□□□ -2.23
TIMP3P35625 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TIMP3P35625 Y_RNA.298-201ENST00000364960 107 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 Y_RNA.528-201ENST00000384575 108 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 Y_RNA.563-201ENST00000384707 108 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 MIRLET7F2-201ENST00000385277 83 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TIMP3P35625 SNORA26.6-201ENST00000391256 115 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 RPS3AP1-201ENST00000413190 320 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 RNU2-35P-201ENST00000516446 142 ntBASIC1.14□□□□□ -2.23
TIMP3P35625 MTND5P18-201ENST00000445624 1801 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 SNORA22.1-201ENST00000362701 134 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 SNORA25.3-201ENST00000363205 127 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 Y_RNA.430-201ENST00000384081 110 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 POLR2J4-204ENST00000418424 324 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 RNU7-123P-201ENST00000515911 60 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 Z97988.1-201ENST00000637697 135 ntBASIC1.13□□□□□ -2.23
TIMP3P35625 RNU6-1290P-201ENST00000362957 109 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.12□□□□□ -2.23
TIMP3P35625 AL512326.2-201ENST00000426359 151 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 snoU13.25-201ENST00000458945 104 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 COX6CP6-201ENST00000490840 228 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 RNU6-165P-201ENST00000517170 99 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 MIR6841-201ENST00000637129 72 ntBASIC1.12□□□□□ -2.23
TIMP3P35625 Y_RNA.171-201ENST00000363760 102 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 Y_RNA.531-201ENST00000384589 121 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 SNORD38B-201ENST00000384690 67 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 MIR759-201ENST00000390224 91 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
TIMP3P35625 AC090844.1-201ENST00000422019 156 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 AC245047.7-201ENST00000440265 293 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 RNU7-113P-201ENST00000459273 62 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 AC004812.1-201ENST00000540773 146 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 PRELID3BP2-201ENST00000605362 201 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 SNORD38B-202ENST00000625943 69 ntBASIC1.11□□□□□ -2.23
TIMP3P35625 Y_RNA.198-201ENST00000364013 98 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 Y_RNA.273-201ENST00000364703 102 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 Y_RNA.353-201ENST00000365440 108 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 MIR548A3-201ENST00000385297 97 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 RNU6-602P-201ENST00000411155 105 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 Y_RNA.629-201ENST00000411368 105 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.1□□□□□ -2.23
TIMP3P35625 Y_RNA.649-201ENST00000459077 103 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 SNORD33.1-201ENST00000516213 88 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 RNU6-1258P-201ENST00000516911 111 ntBASIC1.1□□□□□ -2.23
TIMP3P35625 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
TIMP3P35625 MIR103A2-201ENST00000362154 78 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNU6-834P-201ENST00000362367 110 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNA5SP264-201ENST00000363115 107 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 Y_RNA.213-201ENST00000364178 111 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNU6-396P-201ENST00000365369 105 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNU6-1056P-201ENST00000383996 107 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNU6-1104P-201ENST00000384723 104 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 RNU6-735P-201ENST00000410612 107 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 AC022523.2-201ENST00000561045 150 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 MTND5P34-201ENST00000568888 325 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 AL670379.3-201ENST00000605040 251 ntBASIC1.09□□□□□ -2.23
TIMP3P35625 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TIMP3P35625 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TIMP3P35625 SNORD115-2-201ENST00000362842 82 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 SNORD115-20-201ENST00000365099 82 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 RNU6-1064P-201ENST00000410626 104 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 RNU6-1054P-201ENST00000411293 104 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 AC113410.1-201ENST00000505029 247 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 MIR2115-201ENST00000516657 100 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 RNA5SP33-201ENST00000516687 98 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
TIMP3P35625 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
TIMP3P35625 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
TIMP3P35625 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
TIMP3P35625 Y_RNA.299-201ENST00000364973 94 ntBASIC1.07□□□□□ -2.24
TIMP3P35625 RNU6-1144P-201ENST00000384247 104 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms