Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RN7SL327P-201ENST00000488659 223 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 RNU7-6P-201ENST00000516845 62 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.54□□□□□ -2.16
PTPN7P35236 RN7SL853P-201ENST00000617250 223 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 AL035470.1-201ENST00000622571 220 ntBASIC1.54□□□□□ -2.16
PTPN7P35236 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 Y_RNA.344-201ENST00000365381 112 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 Y_RNA.362-201ENST00000365518 110 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 RNU6-44P-201ENST00000384045 107 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 RNU6-342P-201ENST00000384521 104 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 RN7SKP88-201ENST00000516847 250 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 7SK.8-201ENST00000612110 250 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 7SK.11-201ENST00000615477 250 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 7SK.13-201ENST00000622040 250 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 MIR6516-201ENST00000630554 81 ntBASIC1.53□□□□□ -2.16
PTPN7P35236 MIR103A2-201ENST00000362154 78 ntBASIC1.52□□□□□ -2.17
PTPN7P35236 Y_RNA.81-201ENST00000362997 102 ntBASIC1.52□□□□□ -2.17
PTPN7P35236 AC048334.1-201ENST00000477975 159 ntBASIC1.52□□□□□ -2.17
PTPN7P35236 AL391516.1-201ENST00000554380 2449 ntBASIC1.52□□□□□ -2.17
PTPN7P35236 SNORD115-19-201ENST00000363098 82 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 SNORD115-18-201ENST00000363293 82 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 SNORD115-17-201ENST00000364612 82 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 MT-TN-201ENST00000387400 73 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 MIR1261-201ENST00000408659 82 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.51□□□□□ -2.17
PTPN7P35236 MIR2115-201ENST00000516657 100 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 RNU7-35P-201ENST00000517174 62 ntBASIC1.51□□□□□ -2.17
PTPN7P35236 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.51□□□□□ -2.17
PTPN7P35236 Y_RNA.85-201ENST00000363014 111 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 SNORA32-201ENST00000384072 121 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 SNORA18-201ENST00000384416 132 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.5□□□□□ -2.17
PTPN7P35236 snoU13.2-201ENST00000459201 104 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 Y_RNA.773-201ENST00000607168 90 ntBASIC1.5□□□□□ -2.17
PTPN7P35236 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
PTPN7P35236 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 RNU6-654P-201ENST00000364373 107 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 Y_RNA.363-201ENST00000365529 113 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 RNU6-613P-201ENST00000410412 108 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.49□□□□□ -2.17
PTPN7P35236 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
PTPN7P35236 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
PTPN7P35236 RNU6-755P-201ENST00000364400 103 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 RNU6-60P-201ENST00000364792 103 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 RPL39P34-201ENST00000477141 156 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 MIR6740-201ENST00000618268 113 ntBASIC1.48□□□□□ -2.17
PTPN7P35236 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.47□□□□□ -2.17
PTPN7P35236 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PTPN7P35236 MIR377-201ENST00000362145 69 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 SNORA63.5-201ENST00000363548 123 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 RNU6-580P-201ENST00000365159 107 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 SNORA22-201ENST00000383907 134 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 MIR563-201ENST00000385080 79 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 RNU6-1086P-201ENST00000410930 100 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 RNU6-412P-201ENST00000516434 106 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 MIR1255B1-201ENST00000636325 63 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 AL589743.1-201ENST00000551932 2712 ntBASIC1.47□□□□□ -2.17
PTPN7P35236 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PTPN7P35236 RNU6-1107P-201ENST00000364817 104 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 RNU6-616P-201ENST00000384353 107 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 RNU6-1237P-201ENST00000384777 107 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 MIR588-201ENST00000384900 83 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 RNU6-205P-201ENST00000390858 107 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 SNORA75.2-201ENST00000391138 150 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 SNORA75.3-201ENST00000391231 150 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 RNU7-79P-201ENST00000516082 62 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 AP000753.3-201ENST00000604083 169 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 AL662814.1-201ENST00000617364 121 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 SEPT14P17-201ENST00000617978 177 ntBASIC1.46□□□□□ -2.18
PTPN7P35236 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PTPN7P35236 SNORA63.4-201ENST00000362763 126 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 Y_RNA.323-201ENST00000365157 109 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 SNORD77B-201ENST00000391112 67 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 RNA5SP95-201ENST00000410319 137 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 PDCD5P2-201ENST00000507570 312 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 RNU6-94P-201ENST00000607728 107 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 AL162726.3-218ENST00000636401 95 ntBASIC1.45□□□□□ -2.18
PTPN7P35236 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
PTPN7P35236 U8.6-201ENST00000364939 135 ntBASIC1.44□□□□□ -2.18
PTPN7P35236 RNY1P13-201ENST00000365030 105 ntBASIC1.44□□□□□ -2.18
PTPN7P35236 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
PTPN7P35236 AC068339.1-201ENST00000526965 141 ntBASIC1.44□□□□□ -2.18
PTPN7P35236 AC141846.1-201ENST00000568348 142 ntBASIC1.44□□□□□ -2.18
PTPN7P35236 AL645939.4-201ENST00000604495 135 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms