Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU6-978P-201ENST00000364371 103 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 Y_RNA.288-201ENST00000364854 92 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 MIR125B2-201ENST00000385128 89 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 RNU6-578P-201ENST00000390980 103 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 SNORD58.1-201ENST00000391313 66 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 MIR938-201ENST00000401216 83 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.38□□□□□ -2.35
HOXA9P31269 MTND2P23-201ENST00000422990 651 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 MTCYBP9-201ENST00000431021 303 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 AL121914.1-201ENST00000450188 156 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 RNU6-327P-201ENST00000516270 127 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 SCARNA15.1-201ENST00000516384 125 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 MIR4308-201ENST00000580634 81 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 RNU2-4P-201ENST00000606190 192 ntBASIC0.38□□□□□ -2.35
HOXA9P31269 SNORD27-201ENST00000363981 72 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU6-1319P-201ENST00000390855 104 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU6-747P-201ENST00000390928 104 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU6-241P-201ENST00000391148 104 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU6-493P-201ENST00000391321 108 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 MIR548H3-201ENST00000408771 118 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 SEPT7P4-201ENST00000437076 306 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 RNU7-102P-201ENST00000458948 62 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 Y_RNA.668-201ENST00000516233 93 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 Y_RNA.680-201ENST00000516441 93 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 MIR378D2-201ENST00000580636 98 ntBASIC0.37□□□□□ -2.35
HOXA9P31269 AL596211.1-201ENST00000569873 2277 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
HOXA9P31269 MIR302B-201ENST00000362188 73 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 Y_RNA.65-201ENST00000362846 100 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 Y_RNA.374-201ENST00000365606 101 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 Y_RNA.477-201ENST00000384352 108 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 SNORA79-201ENST00000408376 140 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 Y_RNA.626-201ENST00000411288 95 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 RNU7-80P-201ENST00000459562 61 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 SCARNA15-202ENST00000516881 127 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.36□□□□□ -2.35
HOXA9P31269 AC090897.1-201ENST00000580909 226 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 SNORD92-201ENST00000585078 85 ntBASIC0.36□□□□□ -2.35
HOXA9P31269 Y_RNA.20-201ENST00000362479 113 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 RNU6-923P-201ENST00000364753 107 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 Y_RNA.430-201ENST00000384081 110 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 SNORD100-201ENST00000408573 76 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 RNA5SP127-201ENST00000411051 133 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 SNORD116-25-201ENST00000516517 92 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
HOXA9P31269 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
HOXA9P31269 RNU6-364P-201ENST00000384387 107 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 MT-TF-201ENST00000387314 71 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 MIR1257-201ENST00000408490 117 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 MIR1197-201ENST00000408818 88 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-447P-201ENST00000410293 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-1118P-201ENST00000410382 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-1076P-201ENST00000410397 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-355P-201ENST00000410427 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-791P-201ENST00000410467 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-705P-201ENST00000410601 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-1100P-201ENST00000410691 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-860P-201ENST00000410860 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-1217P-201ENST00000411276 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 RNU6-785P-201ENST00000411324 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
HOXA9P31269 MIR3128-201ENST00000581957 66 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 AL162730.1-201ENST00000605734 292 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 U6.90-201ENST00000614007 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 U6.70-201ENST00000620287 104 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 MIR6841-201ENST00000637129 72 ntBASIC0.34□□□□□ -2.36
HOXA9P31269 Y_RNA.121-201ENST00000363309 113 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.350-201ENST00000365409 98 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.454-201ENST00000384224 113 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.556-201ENST00000384677 113 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.571-201ENST00000384753 98 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 RNA5SP261-201ENST00000410536 106 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 AC096949.1-201ENST00000412047 152 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.797-201ENST00000515977 94 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 RN7SKP12-201ENST00000516275 143 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 AL662814.1-201ENST00000617364 121 ntBASIC0.33□□□□□ -2.36
HOXA9P31269 Y_RNA.162-201ENST00000363683 102 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 RNU6-1336P-201ENST00000383886 109 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 MIR624-201ENST00000385217 97 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 RNU6-1258P-201ENST00000516911 111 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 MIR3152-201ENST00000579801 74 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 AC062037.2-201ENST00000610137 73 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 MIR8066-201ENST00000617280 78 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 AC021613.1-201ENST00000623880 111 ntBASIC0.32□□□□□ -2.36
HOXA9P31269 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms