Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNU6-1031P-201ENST00000384773 107 ntBASIC1.9□□□□□ -2.11
CTGFP29279 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
CTGFP29279 AC073261.1-201ENST00000429409 121 ntBASIC1.9□□□□□ -2.11
CTGFP29279 SNRPGP14-201ENST00000435400 219 ntBASIC1.9□□□□□ -2.11
CTGFP29279 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
CTGFP29279 AC020891.4-201ENST00000605745 93 ntBASIC1.9□□□□□ -2.11
CTGFP29279 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.9□□□□□ -2.11
CTGFP29279 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CTGFP29279 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTGFP29279 RNU6-1084P-201ENST00000362498 107 ntBASIC1.89□□□□□ -2.11
CTGFP29279 Y_RNA.171-201ENST00000363760 102 ntBASIC1.89□□□□□ -2.11
CTGFP29279 RNU4-67P-201ENST00000364569 141 ntBASIC1.89□□□□□ -2.11
CTGFP29279 RNU6-1189P-201ENST00000383958 107 ntBASIC1.89□□□□□ -2.11
CTGFP29279 RNU6-442P-201ENST00000383968 104 ntBASIC1.89□□□□□ -2.11
CTGFP29279 Y_RNA.454-201ENST00000384224 113 ntBASIC1.89□□□□□ -2.11
CTGFP29279 MIR1912-201ENST00000410389 80 ntBASIC1.89□□□□□ -2.11
CTGFP29279 RNU6-733P-201ENST00000410759 104 ntBASIC1.89□□□□□ -2.11
CTGFP29279 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
CTGFP29279 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
CTGFP29279 SNORD45.4-201ENST00000516629 73 ntBASIC1.89□□□□□ -2.11
CTGFP29279 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
CTGFP29279 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
CTGFP29279 MIR4694-201ENST00000578534 80 ntBASIC1.89□□□□□ -2.11
CTGFP29279 SEPT14P17-201ENST00000617978 177 ntBASIC1.89□□□□□ -2.11
CTGFP29279 Y_RNA.788-201ENST00000622394 112 ntBASIC1.89□□□□□ -2.11
CTGFP29279 MIRLET7C-201ENST00000362160 84 ntBASIC1.88□□□□□ -2.11
CTGFP29279 SNORD115-28-201ENST00000363931 81 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNU6-268P-201ENST00000364174 107 ntBASIC1.88□□□□□ -2.11
CTGFP29279 Y_RNA.316-201ENST00000365118 111 ntBASIC1.88□□□□□ -2.11
CTGFP29279 Y_RNA.336-201ENST00000365307 109 ntBASIC1.88□□□□□ -2.11
CTGFP29279 Y_RNA.351-201ENST00000365436 96 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNU6-616P-201ENST00000384353 107 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNU6-1307P-201ENST00000391012 103 ntBASIC1.88□□□□□ -2.11
CTGFP29279 AC096949.1-201ENST00000412047 152 ntBASIC1.88□□□□□ -2.11
CTGFP29279 Y_RNA.659-201ENST00000515994 113 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNA5SP102-201ENST00000516865 106 ntBASIC1.88□□□□□ -2.11
CTGFP29279 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
CTGFP29279 AC004812.1-201ENST00000540773 146 ntBASIC1.88□□□□□ -2.11
CTGFP29279 AC019288.1-201ENST00000557918 224 ntBASIC1.88□□□□□ -2.11
CTGFP29279 AC027279.3-201ENST00000625055 122 ntBASIC1.88□□□□□ -2.11
CTGFP29279 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
CTGFP29279 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CTGFP29279 RNU6-363P-201ENST00000362895 105 ntBASIC1.87□□□□□ -2.11
CTGFP29279 Y_RNA.95-201ENST00000363079 95 ntBASIC1.87□□□□□ -2.11
CTGFP29279 Y_RNA.470-201ENST00000384307 117 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RNU6-424P-201ENST00000384367 105 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RNU6-163P-201ENST00000384396 106 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RNA5SP144-201ENST00000410846 116 ntBASIC1.87□□□□□ -2.11
CTGFP29279 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.87□□□□□ -2.11
CTGFP29279 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
CTGFP29279 AC004223.1-201ENST00000479840 271 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RPS23P4-201ENST00000487908 423 ntBASIC1.87□□□□□ -2.11
CTGFP29279 SNORA31.17-201ENST00000516953 127 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RNU6-1116P-201ENST00000517269 99 ntBASIC1.87□□□□□ -2.11
CTGFP29279 MIR5694-201ENST00000581190 76 ntBASIC1.87□□□□□ -2.11
CTGFP29279 MIR376B-201ENST00000614515 100 ntBASIC1.87□□□□□ -2.11
CTGFP29279 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
CTGFP29279 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CTGFP29279 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CTGFP29279 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
CTGFP29279 RNU6-53P-201ENST00000365367 106 ntBASIC1.86□□□□□ -2.11
CTGFP29279 RNU6-409P-201ENST00000384114 104 ntBASIC1.86□□□□□ -2.11
CTGFP29279 RNU6-1201P-201ENST00000384227 107 ntBASIC1.86□□□□□ -2.11
CTGFP29279 MIR1323-201ENST00000408090 73 ntBASIC1.86□□□□□ -2.11
CTGFP29279 RNU1-123P-201ENST00000458950 160 ntBASIC1.86□□□□□ -2.11
CTGFP29279 AC114811.1-201ENST00000507207 168 ntBASIC1.86□□□□□ -2.11
CTGFP29279 SNORA18.7-201ENST00000516910 131 ntBASIC1.86□□□□□ -2.11
CTGFP29279 AP003484.1-201ENST00000530974 250 ntBASIC1.86□□□□□ -2.11
CTGFP29279 MIR4452-201ENST00000583004 71 ntBASIC1.86□□□□□ -2.11
CTGFP29279 AC021506.2-201ENST00000612354 169 ntBASIC1.86□□□□□ -2.11
CTGFP29279 AC006441.5-201ENST00000612680 209 ntBASIC1.86□□□□□ -2.11
CTGFP29279 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.86□□□□□ -2.11
CTGFP29279 MIR4662A-201ENST00000637499 67 ntBASIC1.86□□□□□ -2.11
CTGFP29279 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CTGFP29279 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTGFP29279 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTGFP29279 SNORD115-19-201ENST00000363098 82 ntBASIC1.85□□□□□ -2.11
CTGFP29279 SNORD115-18-201ENST00000363293 82 ntBASIC1.85□□□□□ -2.11
CTGFP29279 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
CTGFP29279 SNORD115-17-201ENST00000364612 82 ntBASIC1.85□□□□□ -2.11
CTGFP29279 RNU6-524P-201ENST00000384270 107 ntBASIC1.85□□□□□ -2.11
CTGFP29279 U8.16-201ENST00000391279 133 ntBASIC1.85□□□□□ -2.11
CTGFP29279 RNU6-887P-201ENST00000410660 100 ntBASIC1.85□□□□□ -2.11
CTGFP29279 POLR2J4-204ENST00000418424 324 ntBASIC1.85□□□□□ -2.11
CTGFP29279 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
CTGFP29279 UBL5P1-201ENST00000507979 193 ntBASIC1.85□□□□□ -2.11
CTGFP29279 RNA5SP168-201ENST00000516642 112 ntBASIC1.85□□□□□ -2.11
CTGFP29279 AC103810.7-201ENST00000607821 91 ntBASIC1.85□□□□□ -2.11
CTGFP29279 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.85□□□□□ -2.11
CTGFP29279 AL513423.1-201ENST00000621695 132 ntBASIC1.85□□□□□ -2.11
CTGFP29279 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CTGFP29279 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
CTGFP29279 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.84□□□□□ -2.11
CTGFP29279 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
CTGFP29279 RNU6-509P-201ENST00000363519 107 ntBASIC1.84□□□□□ -2.11
CTGFP29279 SNORD58A-201ENST00000383875 65 ntBASIC1.84□□□□□ -2.11
CTGFP29279 Y_RNA.426-201ENST00000384068 113 ntBASIC1.84□□□□□ -2.11
CTGFP29279 Y_RNA.507-201ENST00000384500 99 ntBASIC1.84□□□□□ -2.11
CTGFP29279 RNU6-360P-201ENST00000390944 104 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms