| YY1 | P25490 | MIR570-201 | ENST00000384917 | 97 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| YY1 | P25490 | DIP2A-IT1-201 | ENST00000442434 | 428 nt | TSL 2 BASIC | 1.41 | □□□□□ -2.18 | | |
| YY1 | P25490 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| YY1 | P25490 | AC011603.4-201 | ENST00000611325 | 277 nt | BASIC | 1.41 | □□□□□ -2.18 | | |
| YY1 | P25490 | RNA5SP264-201 | ENST00000363115 | 107 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.351-201 | ENST00000365436 | 96 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.454-201 | ENST00000384224 | 113 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.488-201 | ENST00000384403 | 102 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | SUMO1P3-201 | ENST00000439961 | 304 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | RPL39P39-201 | ENST00000455840 | 151 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-346P-201 | ENST00000516288 | 111 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | RN7SKP88-201 | ENST00000516847 | 250 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR3973-201 | ENST00000579824 | 107 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | 7SK.8-201 | ENST00000612110 | 250 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | 7SK.11-201 | ENST00000615477 | 250 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | 7SK.13-201 | ENST00000622040 | 250 nt | BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | FAM135A-203 | ENST00000370479 | 5930 nt | TSL 1 (best) BASIC | 1.4 | □□□□□ -2.19 | | |
| YY1 | P25490 | AP003174.1-201 | ENST00000306533 | 376 nt | TSL 2 BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-1319P-201 | ENST00000390855 | 104 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-747P-201 | ENST00000390928 | 104 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-241P-201 | ENST00000391148 | 104 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-177P-201 | ENST00000411257 | 104 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.686-201 | ENST00000516548 | 134 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR3121-201 | ENST00000579680 | 77 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR3133-201 | ENST00000583157 | 78 nt | BASIC | 1.39 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-939P-201 | ENST00000384634 | 107 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | SNORD37.2-201 | ENST00000391075 | 66 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC048334.1-201 | ENST00000477975 | 159 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-426P-201 | ENST00000516464 | 97 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC068338.1-201 | ENST00000565567 | 176 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR4636-201 | ENST00000582271 | 80 nt | BASIC | 1.38 | □□□□□ -2.19 | | |
| YY1 | P25490 | CTDSPL2-202 | ENST00000558373 | 4255 nt | TSL 1 (best) BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-580P-201 | ENST00000365159 | 107 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.420-201 | ENST00000384043 | 110 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | MT-TN-201 | ENST00000387400 | 73 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-460P-201 | ENST00000391158 | 108 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR513C-201 | ENST00000401352 | 84 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | AL603908.1-201 | ENST00000406098 | 201 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC073127.1-201 | ENST00000447336 | 333 nt | TSL 3 BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.37 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC010332.2-201 | ENST00000613083 | 1904 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR377-201 | ENST00000362145 | 69 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-704P-201 | ENST00000364162 | 103 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | SNORD12-201 | ENST00000391002 | 90 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-613P-201 | ENST00000410412 | 108 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC090844.1-201 | ENST00000422019 | 156 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | SNORA31.2-201 | ENST00000516019 | 134 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | SNORD79.1-201 | ENST00000516069 | 84 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | SNORA25.12-201 | ENST00000516202 | 82 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR6717-201 | ENST00000622747 | 73 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | C9orf84-204 | ENST00000394777 | 4955 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-508P-201 | ENST00000363231 | 103 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-309P-201 | ENST00000364573 | 106 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNY4P3-201 | ENST00000365254 | 95 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNY1P6-201 | ENST00000384193 | 109 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | Y_RNA.586-201 | ENST00000391146 | 98 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-257P-201 | ENST00000410238 | 98 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | MTND4LP9-201 | ENST00000427694 | 174 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | MTATP6P21-201 | ENST00000440681 | 189 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU7-67P-201 | ENST00000459003 | 62 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RN7SKP179-201 | ENST00000516126 | 217 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC079466.2-201 | ENST00000585394 | 185 nt | TSL 5 BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR6857-201 | ENST00000613267 | 93 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR8065-201 | ENST00000620577 | 100 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-915P-201 | ENST00000364943 | 103 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-187P-201 | ENST00000384139 | 106 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6-30P-201 | ENST00000384561 | 107 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC244023.1-201 | ENST00000426884 | 112 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | AL138808.1-201 | ENST00000441428 | 371 nt | TSL 2 BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC242498.1-201 | ENST00000604134 | 111 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | U7.2-201 | ENST00000607576 | 63 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | SEPT14P17-201 | ENST00000617978 | 177 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC021613.1-201 | ENST00000623880 | 111 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR6516-201 | ENST00000630554 | 81 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| YY1 | P25490 | MIR758-201 | ENST00000390227 | 88 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORA75.2-201 | ENST00000391138 | 150 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORA75.3-201 | ENST00000391231 | 150 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | MIR548M-201 | ENST00000408260 | 86 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | RNU6-602P-201 | ENST00000411155 | 105 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | AL135923.1-201 | ENST00000413066 | 196 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | RNU7-21P-201 | ENST00000459430 | 62 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | Y_RNA.690-201 | ENST00000516603 | 95 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | AP001328.1-201 | ENST00000528550 | 176 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | RNU6-774P-201 | ENST00000363238 | 107 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORD113-1-201 | ENST00000365321 | 69 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | Y_RNA.343-201 | ENST00000365354 | 112 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | RNU6-81P-201 | ENST00000365608 | 104 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | MIR19B1-201 | ENST00000384829 | 87 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | Y_RNA.617-201 | ENST00000410920 | 90 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | AL022345.2-201 | ENST00000606307 | 135 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| YY1 | P25490 | MIR103A2-201 | ENST00000362154 | 78 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORD115-2-201 | ENST00000362842 | 82 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORD115-20-201 | ENST00000365099 | 82 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| YY1 | P25490 | SNORA80D-201 | ENST00000384488 | 135 nt | BASIC | 1.31 | □□□□□ -2.2 | | |