Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ATP2B4P23634 SNORD1A-201ENST00000364968 72 ntBASIC2.33□□□□□ -2.04
ATP2B4P23634 AC003989.2-201ENST00000440224 169 ntBASIC2.33□□□□□ -2.04
ATP2B4P23634 RNU6-904P-201ENST00000516206 101 ntBASIC2.33□□□□□ -2.04
ATP2B4P23634 RNU7-35P-201ENST00000517174 62 ntBASIC2.33□□□□□ -2.04
ATP2B4P23634 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
ATP2B4P23634 MIR590-201ENST00000385008 97 ntBASIC2.32□□□□□ -2.04
ATP2B4P23634 DEFB131E-201ENST00000532329 154 ntBASIC2.32□□□□□ -2.04
ATP2B4P23634 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.32□□□□□ -2.04
ATP2B4P23634 AP001318.4-201ENST00000616637 121 ntBASIC2.32□□□□□ -2.04
ATP2B4P23634 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.32□□□□□ -2.04
ATP2B4P23634 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATP2B4P23634 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ATP2B4P23634 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 Y_RNA.360-201ENST00000365512 102 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 SNORA19.1-201ENST00000410656 129 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 SNORA7.5-201ENST00000410672 110 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 RPL30P7-201ENST00000479312 323 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 AC019176.1-201ENST00000518519 225 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 MIR4694-201ENST00000578534 80 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 MIR3937-201ENST00000580135 106 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
ATP2B4P23634 Y_RNA.10-201ENST00000362371 110 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 Y_RNA.43-201ENST00000362670 111 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 RNY3P2-201ENST00000362918 102 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 RNU6-396P-201ENST00000365369 105 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 SNORA40.13-201ENST00000516379 120 ntBASIC2.3□□□□□ -2.04
ATP2B4P23634 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ATP2B4P23634 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP2B4P23634 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 Y_RNA.348-201ENST00000365403 103 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 MIR9-3-201ENST00000385084 90 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 RNU6-1086P-201ENST00000410930 100 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 RNU6-521P-201ENST00000516663 105 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 AL096840.1-201ENST00000603287 93 ntBASIC2.29□□□□□ -2.04
ATP2B4P23634 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATP2B4P23634 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ATP2B4P23634 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATP2B4P23634 SNORA25.3-201ENST00000363205 127 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 MIR676-201ENST00000390702 67 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 RNA5SP237-201ENST00000410414 113 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 AC108667.1-201ENST00000428618 249 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 AL133373.1-201ENST00000497098 94 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 RNU7-79P-201ENST00000516082 62 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 RNU6-1018P-201ENST00000516577 106 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.28□□□□□ -2.04
ATP2B4P23634 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.28□□□□□ -2.04
ATP2B4P23634 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.28□□□□□ -2.04
ATP2B4P23634 PRELID3BP2-201ENST00000605362 201 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ATP2B4P23634 AC084768.2-201ENST00000622736 221 ntBASIC2.28□□□□□ -2.04
ATP2B4P23634 RNU6-1099P-201ENST00000363533 107 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 MIR605-201ENST00000385078 83 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 RNU6-679P-201ENST00000391003 106 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 SNORA17.3-201ENST00000391159 129 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 AC027119.1-201ENST00000440877 241 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 RNU7-2P-201ENST00000516096 62 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 SNORA25.15-201ENST00000516487 89 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 MIR2115-201ENST00000516657 100 ntBASIC2.27□□□□□ -2.05
ATP2B4P23634 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-832P-201ENST00000363319 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 SNORD115-35-201ENST00000365122 82 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNA5SP190-201ENST00000365222 118 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-905P-201ENST00000384434 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-1237P-201ENST00000384777 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 MIR577-201ENST00000385196 96 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 MIR1302-7-201ENST00000408841 72 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNA5SP445-201ENST00000515889 115 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-970P-201ENST00000516312 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-109P-201ENST00000516364 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 Y_RNA.676-201ENST00000516393 96 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU6-184P-201ENST00000516514 107 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU1-40P-201ENST00000516816 164 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 RNU1-97P-201ENST00000516872 164 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 AP000753.3-201ENST00000604083 169 ntBASIC2.26□□□□□ -2.05
ATP2B4P23634 Y_RNA.601-201ENST00000410500 113 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 RN7SL274P-201ENST00000492268 272 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 RPS29P11-201ENST00000496507 171 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 RNU11-2P-201ENST00000516898 142 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 RNU6-158P-201ENST00000517104 100 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.25□□□□□ -2.05
ATP2B4P23634 MIR2052-201ENST00000636055 55 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 AL512310.12-203ENST00000640543 90 ntBASIC2.25□□□□□ -2.05
ATP2B4P23634 RNU6-1255P-201ENST00000363434 112 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 RNU6-640P-201ENST00000363693 105 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 MIR206-201ENST00000384872 86 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.24□□□□□ -2.05
ATP2B4P23634 AC244023.1-201ENST00000426884 112 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 AL353813.1-201ENST00000440700 253 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 snoU13.25-201ENST00000458945 104 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 snoU13.2-201ENST00000459201 104 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 SNORD13-201ENST00000459299 104 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 AC008834.1-201ENST00000511612 175 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 SCARNA23-201ENST00000516060 130 ntBASIC2.24□□□□□ -2.05
ATP2B4P23634 SNORD67.1-201ENST00000516618 108 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms