Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNU6-342P-201ENST00000384521 104 ntBASIC1.62□□□□□ -2.15
XPAP23025 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
XPAP23025 MIR1270-201ENST00000459320 83 ntBASIC1.62□□□□□ -2.15
XPAP23025 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
XPAP23025 RPS23P4-201ENST00000487908 423 ntBASIC1.62□□□□□ -2.15
XPAP23025 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
XPAP23025 RNA5SP33-201ENST00000516687 98 ntBASIC1.62□□□□□ -2.15
XPAP23025 MIR4255-201ENST00000579351 72 ntBASIC1.62□□□□□ -2.15
XPAP23025 MIR548AE2-201ENST00000583456 67 ntBASIC1.62□□□□□ -2.15
XPAP23025 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
XPAP23025 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.62□□□□□ -2.15
XPAP23025 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
XPAP23025 SNORD115-2-201ENST00000362842 82 ntBASIC1.61□□□□□ -2.15
XPAP23025 Y_RNA.213-201ENST00000364178 111 ntBASIC1.61□□□□□ -2.15
XPAP23025 SNORD115-20-201ENST00000365099 82 ntBASIC1.61□□□□□ -2.15
XPAP23025 AC245047.7-201ENST00000440265 293 ntBASIC1.61□□□□□ -2.15
XPAP23025 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.61□□□□□ -2.15
XPAP23025 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
XPAP23025 RNU7-6P-201ENST00000516845 62 ntBASIC1.61□□□□□ -2.15
XPAP23025 AC007012.1-201ENST00000567192 175 ntBASIC1.61□□□□□ -2.15
XPAP23025 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
XPAP23025 AL035470.1-201ENST00000622571 220 ntBASIC1.61□□□□□ -2.15
XPAP23025 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
XPAP23025 RNA5SP264-201ENST00000363115 107 ntBASIC1.6□□□□□ -2.15
XPAP23025 RNU6-44P-201ENST00000384045 107 ntBASIC1.6□□□□□ -2.15
XPAP23025 SNORA32-201ENST00000384072 121 ntBASIC1.6□□□□□ -2.15
XPAP23025 SNORD38B-201ENST00000384690 67 ntBASIC1.6□□□□□ -2.15
XPAP23025 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.6□□□□□ -2.15
XPAP23025 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
XPAP23025 RNU6-893P-201ENST00000458841 100 ntBASIC1.6□□□□□ -2.15
XPAP23025 RNU6-589P-201ENST00000516485 107 ntBASIC1.6□□□□□ -2.15
XPAP23025 RN7SKP88-201ENST00000516847 250 ntBASIC1.6□□□□□ -2.15
XPAP23025 7SK.8-201ENST00000612110 250 ntBASIC1.6□□□□□ -2.15
XPAP23025 7SK.11-201ENST00000615477 250 ntBASIC1.6□□□□□ -2.15
XPAP23025 7SK.13-201ENST00000622040 250 ntBASIC1.6□□□□□ -2.15
XPAP23025 SNORD38B-202ENST00000625943 69 ntBASIC1.6□□□□□ -2.15
XPAP23025 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
XPAP23025 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
XPAP23025 MIR103A2-201ENST00000362154 78 ntBASIC1.59□□□□□ -2.15
XPAP23025 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
XPAP23025 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
XPAP23025 Y_RNA.344-201ENST00000365381 112 ntBASIC1.59□□□□□ -2.15
XPAP23025 RNU6-1237P-201ENST00000384777 107 ntBASIC1.59□□□□□ -2.15
XPAP23025 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
XPAP23025 RNY4P18-201ENST00000391107 89 ntBASIC1.59□□□□□ -2.15
XPAP23025 RNA5SP95-201ENST00000410319 137 ntBASIC1.59□□□□□ -2.15
XPAP23025 AC087741.2-201ENST00000619415 172 ntBASIC1.59□□□□□ -2.15
XPAP23025 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
XPAP23025 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
XPAP23025 MIR759-201ENST00000390224 91 ntBASIC1.58□□□□□ -2.16
XPAP23025 AL035461.1-201ENST00000421490 332 ntBASIC1.58□□□□□ -2.16
XPAP23025 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
XPAP23025 Y_RNA.709-201ENST00000516952 92 ntBASIC1.58□□□□□ -2.16
XPAP23025 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
XPAP23025 MIR3163-201ENST00000581592 73 ntBASIC1.58□□□□□ -2.16
XPAP23025 Y_RNA.362-201ENST00000365518 110 ntBASIC1.57□□□□□ -2.16
XPAP23025 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
XPAP23025 SNORA18-201ENST00000384416 132 ntBASIC1.57□□□□□ -2.16
XPAP23025 MIR548D2-201ENST00000384955 97 ntBASIC1.57□□□□□ -2.16
XPAP23025 RNU6-205P-201ENST00000390858 107 ntBASIC1.57□□□□□ -2.16
XPAP23025 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
XPAP23025 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
XPAP23025 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
XPAP23025 RNU6-919P-201ENST00000516731 104 ntBASIC1.57□□□□□ -2.16
XPAP23025 Y_RNA.773-201ENST00000607168 90 ntBASIC1.57□□□□□ -2.16
XPAP23025 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
XPAP23025 RNU6-396P-201ENST00000365369 105 ntBASIC1.56□□□□□ -2.16
XPAP23025 Y_RNA.354-201ENST00000365448 111 ntBASIC1.56□□□□□ -2.16
XPAP23025 RNU6-880P-201ENST00000384526 107 ntBASIC1.56□□□□□ -2.16
XPAP23025 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
XPAP23025 AC063976.4-201ENST00000421971 163 ntBASIC1.56□□□□□ -2.16
XPAP23025 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.56□□□□□ -2.16
XPAP23025 SNORA63.4-201ENST00000362763 126 ntBASIC1.55□□□□□ -2.16
XPAP23025 SNORA63.5-201ENST00000363548 123 ntBASIC1.55□□□□□ -2.16
XPAP23025 RNY4P6-201ENST00000363667 96 ntBASIC1.55□□□□□ -2.16
XPAP23025 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
XPAP23025 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.55□□□□□ -2.16
XPAP23025 MIR6740-201ENST00000618268 113 ntBASIC1.55□□□□□ -2.16
XPAP23025 MIR1255B1-201ENST00000636325 63 ntBASIC1.55□□□□□ -2.16
XPAP23025 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORA22-201ENST00000383907 134 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORA17.3-201ENST00000391159 129 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
XPAP23025 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
XPAP23025 MIR2115-201ENST00000516657 100 ntBASIC1.54□□□□□ -2.16
XPAP23025 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
XPAP23025 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
XPAP23025 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.54□□□□□ -2.16
XPAP23025 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
XPAP23025 uc_338.6-201ENST00000613544 171 ntBASIC1.54□□□□□ -2.16
XPAP23025 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
XPAP23025 Y_RNA.281-201ENST00000364774 94 ntBASIC1.53□□□□□ -2.16
XPAP23025 Y_RNA.299-201ENST00000364973 94 ntBASIC1.53□□□□□ -2.16
XPAP23025 snoU13.2-201ENST00000459201 104 ntBASIC1.53□□□□□ -2.16
XPAP23025 RNU7-35P-201ENST00000517174 62 ntBASIC1.53□□□□□ -2.16
XPAP23025 MIR4679-2-201ENST00000578358 77 ntBASIC1.53□□□□□ -2.16
XPAP23025 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
XPAP23025 Y_RNA.81-201ENST00000362997 102 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms