Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.42□□□□□ -2.02
RFX1P22670 AC027119.1-201ENST00000440877 241 ntBASIC2.42□□□□□ -2.02
RFX1P22670 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
RFX1P22670 AC141557.1-201ENST00000540982 400 ntBASIC2.42□□□□□ -2.02
RFX1P22670 RNU6-1099P-201ENST00000363533 107 ntBASIC2.41□□□□□ -2.02
RFX1P22670 AC008834.1-201ENST00000511612 175 ntBASIC2.41□□□□□ -2.02
RFX1P22670 AC108729.3-201ENST00000513484 108 ntBASIC2.41□□□□□ -2.02
RFX1P22670 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
RFX1P22670 RNU11-2P-201ENST00000516898 142 ntBASIC2.41□□□□□ -2.02
RFX1P22670 AP003716.2-201ENST00000528260 108 ntBASIC2.41□□□□□ -2.02
RFX1P22670 FAM71BP1-201ENST00000604431 523 ntBASIC2.41□□□□□ -2.02
RFX1P22670 Y_RNA.818-201ENST00000618813 71 ntBASIC2.41□□□□□ -2.02
RFX1P22670 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
RFX1P22670 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RFX1P22670 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX1P22670 Y_RNA.360-201ENST00000365512 102 ntBASIC2.4□□□□□ -2.03
RFX1P22670 MIR605-201ENST00000385078 83 ntBASIC2.4□□□□□ -2.03
RFX1P22670 RNU1-78P-201ENST00000391248 165 ntBASIC2.4□□□□□ -2.03
RFX1P22670 MIR1302-4-201ENST00000408701 150 ntBASIC2.4□□□□□ -2.03
RFX1P22670 MIR1302-7-201ENST00000408841 72 ntBASIC2.4□□□□□ -2.03
RFX1P22670 RNU6-1086P-201ENST00000410930 100 ntBASIC2.4□□□□□ -2.03
RFX1P22670 HMGN2P19-201ENST00000425149 265 ntBASIC2.4□□□□□ -2.03
RFX1P22670 snoU13.25-201ENST00000458945 104 ntBASIC2.4□□□□□ -2.03
RFX1P22670 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
RFX1P22670 RNU6-947P-201ENST00000516264 106 ntBASIC2.4□□□□□ -2.03
RFX1P22670 RNU6-521P-201ENST00000516663 105 ntBASIC2.4□□□□□ -2.03
RFX1P22670 DEFB131E-201ENST00000532329 154 ntBASIC2.4□□□□□ -2.03
RFX1P22670 AP000942.3-201ENST00000603702 160 ntBASIC2.4□□□□□ -2.03
RFX1P22670 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
RFX1P22670 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
RFX1P22670 RNU4-36P-201ENST00000364294 144 ntBASIC2.39□□□□□ -2.03
RFX1P22670 SNORD73B-201ENST00000364394 72 ntBASIC2.39□□□□□ -2.03
RFX1P22670 RNU6-1131P-201ENST00000364955 107 ntBASIC2.39□□□□□ -2.03
RFX1P22670 SNORA7.5-201ENST00000410672 110 ntBASIC2.39□□□□□ -2.03
RFX1P22670 RPL31P63-201ENST00000422565 375 ntBASIC2.39□□□□□ -2.03
RFX1P22670 RNU7-79P-201ENST00000516082 62 ntBASIC2.39□□□□□ -2.03
RFX1P22670 RNU6-109P-201ENST00000516364 107 ntBASIC2.39□□□□□ -2.03
RFX1P22670 RNU6-184P-201ENST00000516514 107 ntBASIC2.39□□□□□ -2.03
RFX1P22670 AC024614.2-201ENST00000577584 372 ntBASIC2.39□□□□□ -2.03
RFX1P22670 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.39□□□□□ -2.03
RFX1P22670 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RFX1P22670 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RFX1P22670 RNY3P2-201ENST00000362918 102 ntBASIC2.38□□□□□ -2.03
RFX1P22670 RNU6-396P-201ENST00000365369 105 ntBASIC2.38□□□□□ -2.03
RFX1P22670 RNU6-679P-201ENST00000391003 106 ntBASIC2.38□□□□□ -2.03
RFX1P22670 AC244023.1-201ENST00000426884 112 ntBASIC2.38□□□□□ -2.03
RFX1P22670 AL353813.1-201ENST00000440700 253 ntBASIC2.38□□□□□ -2.03
RFX1P22670 AC245517.4-201ENST00000448601 281 ntBASIC2.38□□□□□ -2.03
RFX1P22670 RNA5SP445-201ENST00000515889 115 ntBASIC2.38□□□□□ -2.03
RFX1P22670 MIR4694-201ENST00000578534 80 ntBASIC2.38□□□□□ -2.03
RFX1P22670 MIR3664-201ENST00000579074 99 ntBASIC2.38□□□□□ -2.03
RFX1P22670 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
RFX1P22670 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX1P22670 SNRPGP19-201ENST00000603826 189 ntBASIC2.38□□□□□ -2.03
RFX1P22670 AC242498.1-201ENST00000604134 111 ntBASIC2.38□□□□□ -2.03
RFX1P22670 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RFX1P22670 AL359851.1-201ENST00000569460 4997 ntBASIC2.38□□□□□ -2.03
RFX1P22670 RNU6-294P-201ENST00000364999 102 ntBASIC2.37□□□□□ -2.03
RFX1P22670 SNORD115-35-201ENST00000365122 82 ntBASIC2.37□□□□□ -2.03
RFX1P22670 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
RFX1P22670 RNU6-49P-201ENST00000384256 107 ntBASIC2.37□□□□□ -2.03
RFX1P22670 MIR577-201ENST00000385196 96 ntBASIC2.37□□□□□ -2.03
RFX1P22670 SNORA40.13-201ENST00000516379 120 ntBASIC2.37□□□□□ -2.03
RFX1P22670 RNU6-1018P-201ENST00000516577 106 ntBASIC2.37□□□□□ -2.03
RFX1P22670 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.37□□□□□ -2.03
RFX1P22670 MIR4422-201ENST00000581938 83 ntBASIC2.37□□□□□ -2.03
RFX1P22670 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX1P22670 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX1P22670 Y_RNA.4-201ENST00000362333 112 ntBASIC2.36□□□□□ -2.03
RFX1P22670 SNORA25.3-201ENST00000363205 127 ntBASIC2.36□□□□□ -2.03
RFX1P22670 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
RFX1P22670 MT-TN-201ENST00000387400 73 ntBASIC2.36□□□□□ -2.03
RFX1P22670 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFX1P22670 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFX1P22670 RNU6-832P-201ENST00000363319 107 ntBASIC2.35□□□□□ -2.03
RFX1P22670 RNU6-1237P-201ENST00000384777 107 ntBASIC2.35□□□□□ -2.03
RFX1P22670 Y_RNA.601-201ENST00000410500 113 ntBASIC2.35□□□□□ -2.03
RFX1P22670 RNU7-2P-201ENST00000516096 62 ntBASIC2.35□□□□□ -2.03
RFX1P22670 RNU6-295P-201ENST00000516901 104 ntBASIC2.35□□□□□ -2.03
RFX1P22670 AC019176.1-201ENST00000518519 225 ntBASIC2.35□□□□□ -2.03
RFX1P22670 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.35□□□□□ -2.03
RFX1P22670 MIR3937-201ENST00000580135 106 ntBASIC2.35□□□□□ -2.03
RFX1P22670 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RFX1P22670 SNORA64-201ENST00000384674 134 ntBASIC2.34□□□□□ -2.03
RFX1P22670 MIR934-201ENST00000401241 83 ntBASIC2.34□□□□□ -2.03
RFX1P22670 RN7SL274P-201ENST00000492268 272 ntBASIC2.34□□□□□ -2.03
RFX1P22670 SCARNA23-201ENST00000516060 130 ntBASIC2.34□□□□□ -2.03
RFX1P22670 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.34□□□□□ -2.03
RFX1P22670 Y_RNA.10-201ENST00000362371 110 ntBASIC2.33□□□□□ -2.04
RFX1P22670 RNA5SP264-201ENST00000363115 107 ntBASIC2.33□□□□□ -2.04
RFX1P22670 MIR488-201ENST00000365739 83 ntBASIC2.33□□□□□ -2.04
RFX1P22670 MIR206-201ENST00000384872 86 ntBASIC2.33□□□□□ -2.04
RFX1P22670 RNU6-970P-201ENST00000516312 107 ntBASIC2.33□□□□□ -2.04
RFX1P22670 MIR2115-201ENST00000516657 100 ntBASIC2.33□□□□□ -2.04
RFX1P22670 MIR514B-201ENST00000516774 80 ntBASIC2.33□□□□□ -2.04
RFX1P22670 RNU6-158P-201ENST00000517104 100 ntBASIC2.33□□□□□ -2.04
RFX1P22670 RNU6-844P-201ENST00000517175 102 ntBASIC2.33□□□□□ -2.04
RFX1P22670 AL512310.8-201ENST00000550183 120 ntBASIC2.33□□□□□ -2.04
RFX1P22670 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFX1P22670 Y_RNA.93-201ENST00000363066 109 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms